RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CHST7Q9NS84 486 aa4.27□□□□□ -1.73
ZEB1-212ENST00000558655 NFKBIL1Q9UBC1 381 aaPredicted RBP4.27□□□□□ -1.73
ZEB1-212ENST00000558655 RABGEF1Q9UJ41 708 aa4.27□□□□□ -1.73
ZEB1-212ENST00000558655 DNAJC12Q9UKB3 198 aa4.27□□□□□ -1.73
ZEB1-212ENST00000558655 AJAP1Q9UKB5 411 aaPredicted RBP4.27□□□□□ -1.73
ZEB1-212ENST00000558655 PCDHGC3Q9UN70 934 aa4.27□□□□□ -1.73
ZEB1-212ENST00000558655 PLAAQ9Y263 795 aa4.27□□□□□ -1.73
ZEB1-212ENST00000558655 BZW2Q9Y6E2 419 aaKnown RBP4.27□□□□□ -1.73
ZEB1-212ENST00000558655 NUP210Q8TEM1 1887 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SSU72P8A0A1W2PR75 194 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 FAM221AA4D161 298 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 H3BQF6 201 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 NRP1O14786 923 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 PDPK1O15530 556 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TRAPPC3O43617 180 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 AHCYL1O43865 530 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 MAP3K6O95382 1288 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 LCA5LO95447 670 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 POMCP01189 267 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ATP1A1P05023 1023 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ALDH2P05091 517 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 POU2F2P09086 479 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ODC1P11926 461 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 XPAP23025 273 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 CDH5P33151 784 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 STAT1P42224 750 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 LHX1P48742 406 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 RPL34P49207 117 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 GATMP50440 423 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 CLCNKBP51801 687 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 BPIFB4P59827 614 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 RNASE9P60153 205 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SMARCB1Q12824 385 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 STILQ15468 1287 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SEPT7Q16181 437 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SOWAHAQ2M3V2 549 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TIGD5Q53EQ6 642 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 GLRA4Q5JXX5 417 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 C9orf50Q5SZB4 431 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TRIM68Q6AZZ1 485 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 PPP1R2P3Q6NXS1 205 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 WDR59Q6PJI9 974 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TMCO3Q6UWJ1 677 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 OTOP2Q7RTS6 562 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 IRF2BP2Q7Z5L9 587 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TRIM74Q86UV6 250 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TRIM73Q86UV7 250 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 GALNT13Q8IUC8 556 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 FIBCD1Q8N539 461 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 BRSK1Q8TDC3 778 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ZFRQ96KR1 1074 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SENP8Q96LD8 212 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 RTP3Q9BQQ7 232 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 NUDT16L1Q9BRJ7 211 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 VN1R3Q9BXE9 311 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 UBXN6Q9BZV1 441 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 RABEP2Q9H5N1 569 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 RXFP1Q9HBX9 757 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 OSGEPQ9NPF4 335 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ANLNQ9NQW6 1124 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SPG21Q9NZD8 308 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 DNAJB4Q9UDY4 337 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ADAM28Q9UKQ2 775 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 BARX2Q9UMQ3 279 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SSX2IPQ9Y2D8 614 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 IRAK3Q9Y616 596 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 EPN1Q9Y6I3 576 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SF3B1O75533 1304 aaKnown RBP eCLIP4.26□□□□□ -1.732e-6■■■■■ 172.3
ZEB1-212ENST00000558655 FANCMQ8IYD8 2048 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 LINC01553A4QN01 128 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 OR6C75A6NL08 312 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 M0R3H8 397 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SOD2P04179 222 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 CYP1A2P05177 515 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TRIM21P19474 475 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 BMPR1AP36894 532 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 RAD23BP54727 409 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 GSCP56915 257 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 TNNC1P63316 161 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 DSG1Q02413 1049 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 BTG3Q14201 252 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 DRAP1Q14919 205 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ASTE1Q2TB18 679 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SWT1Q5T5J6 900 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 HGSNATQ68CP4 663 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 FAM171BQ6P995 826 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 KCNT2Q6UVM3 1135 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 PDZD3Q86UT5 571 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SLC41A1Q8IVJ1 513 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 UBALD2Q8IYN6 164 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 NRSN1Q8IZ57 195 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 OR8K1Q8NGG5 319 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 SLC30A5Q8TAD4 765 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 C2orf15Q8WU43 125 aaKnown RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 BCL7CQ8WUZ0 217 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 WBP1Q96G27 269 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 PPM1MQ96MI6 270 aa4.26□□□□□ -1.73
ZEB1-212ENST00000558655 FAM193BQ96PV7 902 aaPredicted RBP4.26□□□□□ -1.73
ZEB1-212ENST00000558655 ACBD6Q9BR61 282 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms