RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 AZIN2Q96A70 460 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 ZNF707Q96C28 371 aaPredicted RBP12.9□□□□□ -0.34
TPM1-209ENST00000558072 BTBD6Q96KE9 485 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 NECTIN4Q96NY8 510 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 HAPLN3Q96S86 360 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 RETREG1Q9H6L5 497 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 TASP1Q9H6P5 420 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 NMUR1Q9HB89 426 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 IL21Q9HBE4 155 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 CLEC1BQ9P126 229 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
TPM1-209ENST00000558072 LSM7Q9UK45 103 aaKnown RBP12.9□□□□□ -0.34
TPM1-209ENST00000558072 SNX12Q9UMY4 172 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 EFR3BQ9Y2G0 817 aa12.9□□□□□ -0.34
TPM1-209ENST00000558072 ZFP37Q9Y6Q3 630 aaPredicted RBP12.9□□□□□ -0.34
TPM1-209ENST00000558072 H3BQ06 376 aaPredicted RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 OAS1P00973 400 aaKnown RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 LTBRP36941 435 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 AVPR1AP37288 418 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 MTHFRP42898 656 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 SLC11A2P49281 568 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 HDAC4P56524 1084 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 CKAP4Q07065 602 aaKnown RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 ZNF252P-AS1Q0IIN9 211 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 EFEMP1Q12805 493 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 C15orf59Q2T9L4 293 aaPredicted RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 SYCE2Q6PIF2 218 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 KCTD6Q8NC69 237 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 PABPC5Q96DU9 382 aaKnown RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 WDR24Q96S15 920 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 TLR10Q9BXR5 811 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 LRRC3Q9BY71 257 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 TRIM7Q9C029 511 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 OSBPL2Q9H1P3 480 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 DNMT3BQ9UBC3 853 aaKnown RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
TPM1-209ENST00000558072 MRPS23Q9Y3D9 190 aaKnown RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 ZNF638Q14966 1978 aaKnown RBP12.89□□□□□ -0.35
TPM1-209ENST00000558072 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 SLC12A8A0AV02 714 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 KCNK3O14649 394 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 TADA3O75528 432 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 OLFM2O95897 454 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 MBL2P11226 248 aaPredicted RBP12.88□□□□□ -0.35
TPM1-209ENST00000558072 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
TPM1-209ENST00000558072 ADRA1BP35368 520 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 ARL4AP40617 200 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 TUBB4BP68371 445 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 SLC7A9P82251 487 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 EIF4EBP2Q13542 120 aaPredicted RBP12.88□□□□□ -0.35
TPM1-209ENST00000558072 KRT81Q14533 505 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 SKIV2LQ15477 1246 aaKnown RBP12.88□□□□□ -0.35
TPM1-209ENST00000558072 PPP2R5EQ16537 467 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 CCDC181Q5TID7 509 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 LRRC31Q6UY01 552 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 MNS1Q8NEH6 495 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 E2F7Q96AV8 911 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 C1orf74Q96LT6 269 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 EPAS1Q99814 870 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 MAK16Q9BXY0 300 aaKnown RBP12.88□□□□□ -0.35
TPM1-209ENST00000558072 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 KIF9Q9HAQ2 790 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 HOMER3Q9NSC5 361 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 ARHGEF38Q9NXL2 777 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 STIM2Q9P246 746 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
TPM1-209ENST00000558072 TTC7AQ9ULT0 858 aaPredicted RBP12.88□□□□□ -0.35
TPM1-209ENST00000558072 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 A0A1W2PRU2 124 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 H3BRJ5 948 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 ENC1O14682 589 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 COCHO43405 550 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
TPM1-209ENST00000558072 ATP1A1P05023 1023 aaKnown RBP12.87□□□□□ -0.35
TPM1-209ENST00000558072 CKMP06732 381 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 TCF3P15923 654 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 FSHRP23945 695 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 PTPN7P35236 360 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 CCR2P41597 374 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 HCAR3P49019 387 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 PEX5P50542 639 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 CYP4F8P98187 520 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 NRG1Q02297 640 aaPredicted RBP12.87□□□□□ -0.35
TPM1-209ENST00000558072 SLC25A11Q02978 314 aaKnown RBP12.87□□□□□ -0.35
TPM1-209ENST00000558072 TFDP2Q14188 446 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 COL19A1Q14993 1142 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 DPYSL2Q16555 572 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 WHAMMP3Q1A5X7 153 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 SLC5A9Q2M3M2 681 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 CTC1Q2NKJ3 1217 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 STXBP5Q5T5C0 1151 aa12.87□□□□□ -0.35
TPM1-209ENST00000558072 GPR158Q5T848 1215 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms