RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 M0R296 226 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 AP5Z1O43299 807 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 ENDOD1O94919 500 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 APOEP02649 317 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 SKILP12757 684 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 PTPN9P43378 593 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 GAD2Q05329 585 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 ACAP1Q15027 740 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 SYPL2Q5VXT5 272 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 PLEKHA7Q6IQ23 1121 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 WDR59Q6PJI9 974 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 CCDC170Q8IYT3 715 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 SYNPOQ8N3V7 929 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 ATP6V0D2Q8N8Y2 350 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 OLIG1Q8TAK6 271 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 FNIP1Q8TF40 1166 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 BTN2A3PQ96KV6 586 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 NPY6RQ99463 290 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 IER2Q9BTL4 223 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHMT2-234ENST00000557703 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 HPS4Q9NQG7 708 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 SPHK2Q9NRA0 654 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 TJP2Q9UDY2 1190 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 NUDT5Q9UKK9 219 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 PIAS3Q9Y6X2 628 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 KANSL1LA0AUZ9 987 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 TRDMT1O14717 391 aaKnown RBP14.24□□□□□ -0.13
SHMT2-234ENST00000557703 HOXC11O43248 304 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-234ENST00000557703 CYBBP04839 570 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 ABCB4P21439 1286 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 CORO1AP31146 461 aaKnown RBP14.24□□□□□ -0.13
SHMT2-234ENST00000557703 SDC4P31431 198 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 AIF1P55008 147 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 DHCR24Q15392 516 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 ASTE1Q2TB18 679 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-234ENST00000557703 FBXO43Q4G163 708 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 DNAJC24Q6P3W2 148 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 STRADAQ7RTN6 431 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 BNIPLQ7Z465 357 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 SIX5Q8N196 739 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 TC2NQ8N9U0 490 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 RIN3Q8TB24 985 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 SLC2A11Q9BYW1 496 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 LINC00597Q9H2U6 94 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 MFSD1Q9H3U5 465 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 EBF3Q9H4W6 596 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 RETREG1Q9H6L5 497 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 LUC7LQ9NQ29 371 aaKnown RBP14.24□□□□□ -0.13
SHMT2-234ENST00000557703 HEBP1Q9NRV9 189 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 DDIT4Q9NX09 232 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 GTSE1Q9NYZ3 720 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 SFMBT1Q9UHJ3 866 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 INTUQ9ULD6 942 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 WNT6Q9Y6F9 365 aa14.24□□□□□ -0.13
SHMT2-234ENST00000557703 TCRBV5S1A1TA0A578 114 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 C2CD4BA6NLJ0 364 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 SPECC1L-ADORA2AF8WAN1 911 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 MDM4O15151 490 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 AKR1B10O60218 316 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 ADCY5O95622 1261 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 PDGFRAP16234 1089 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 DRD1P21728 446 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 CTHP32929 405 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 CXCR3P49682 368 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 ADKP55263 362 aaKnown RBP14.23□□□□□ -0.13
SHMT2-234ENST00000557703 GSDMDP57764 484 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 TAF5Q15542 800 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 DGKKQ5KSL6 1271 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 DCUN1D2Q6PH85 259 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 RHBDF2Q6PJF5 856 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 TAC4Q86UU9 113 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 TMTC1Q8IUR5 882 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 GPIHBP1Q8IV16 184 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 DENND1CQ8IV53 801 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 BBS7Q8IWZ6 715 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 FAM3CQ92520 227 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 CENPIQ92674 756 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-234ENST00000557703 PIWIL1Q96J94 861 aaKnown RBP14.23□□□□□ -0.13
SHMT2-234ENST00000557703 FCRL2Q96LA5 508 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-234ENST00000557703 XPO6Q96QU8 1125 aaKnown RBP14.23□□□□□ -0.13
SHMT2-234ENST00000557703 CNPY3Q9BT09 278 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 EPHX3Q9H6B9 360 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 WDCPQ9H6R7 721 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 FAM204AQ9H8W3 233 aa14.23□□□□□ -0.13
SHMT2-234ENST00000557703 AGO1Q9UL18 857 aaKnown RBP14.23□□□□□ -0.13
SHMT2-234ENST00000557703 A0A087X0T9 212 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 A0A0A0MRY4 1105 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 TYW5A2RUC4 315 aaKnown RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 KRBA1A5PL33 1030 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 GOLGA6L3A6NEY3 463 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 KCNU1A8MYU2 1149 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 GOLGA8SH3BPF8 625 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 M0QYT0 321 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 ACSL4O60488 711 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 GRAP2O75791 330 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 KLKB1P03952 638 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 CYP17A1P05093 508 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 FAM228BP0C875 321 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 IRF1P10914 325 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms