RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SLC9A4Q6AI14 798 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 C16orf46Q6P387 395 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 MPZL3Q6UWV2 235 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 RNF111Q6ZNA4 994 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 ZNF534Q76KX8 674 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 MPP5Q8N3R9 675 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 MMP19Q99542 508 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 ZCWPW1Q9H0M4 648 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 MGAMO43451 1857 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 PHIPQ8WWQ0 1821 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 CILPO75339 1184 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 PDE5AO76074 875 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 GSRP00390 522 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 VDRP11473 427 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 GRK2P25098 689 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 SERPINB6P35237 376 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 AQP4P55087 323 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 LSAMPQ13449 338 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 MMEL1Q495T6 779 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 FAM160B1Q5W0V3 765 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 PDPK2PQ6A1A2 396 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 TRNP1Q6NT89 227 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 CYS1Q717R9 158 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 PCDH19Q8TAB3 1148 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 UBA3Q8TBC4 463 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 NAT14Q8WUY8 206 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 PCDH18Q9HCL0 1135 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 GPATCH2LQ9NWQ4 482 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 MOCS1Q9NZB8 636 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 NDUFA13Q9P0J0 144 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 HMGXB4Q9UGU5 601 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 EMCNQ9ULC0 261 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 PLIN3O60664 434 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 GCATO75600 419 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 MAP3K6O95382 1288 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 METTL18O95568 372 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 KCNA4P22459 653 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 PEX2P28328 305 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 IDH3AP50213 366 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 STAT5BP51692 787 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 BACE1P56817 501 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 LAMTOR4Q0VGL1 99 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 TMEM132BQ14DG7 1078 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 TRIP10Q15642 601 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 FAM183BPQ6ZVS7 135 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 DPH6Q7L8W6 267 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 DRAXINQ8NBI3 349 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 RNF149Q8NC42 400 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 B4GALNT2Q8NHY0 566 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 USP6NLQ92738 828 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 EZH1Q92800 747 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 CCDC124Q96CT7 223 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 HEXIM2Q96MH2 286 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 TEPSINQ96N21 525 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 TEX13BQ9BXU2 312 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 C2orf40Q9H1Z8 148 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 CYP4F11Q9HBI6 524 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 DCDC2Q9UHG0 476 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 SIX4Q9UIU6 781 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 POMPQ9Y244 141 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 SSX2IPQ9Y2D8 614 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 RLFQ13129 1914 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 SF3B1O75533 1304 aaKnown RBP eCLIP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 PEX1O43933 1283 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 IL18RAPO95256 599 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 MXD4Q14582 209 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 PDK3Q15120 406 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 ANKRD20A4Q4UJ75 823 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 LRRC23Q53EV4 343 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 TSHZ1Q6ZSZ6 1077 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 RSPH3Q86UC2 560 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 DEFB107AQ8IZN7 70 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 CDKL2Q92772 493 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 NLRP4Q96MN2 994 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 BTBD9Q96Q07 612 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 TBCBQ99426 244 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 PCYT2Q99447 389 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 RPF1Q9H9Y2 349 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 NGRNQ9NPE2 291 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 ZNF277Q9NRM2 450 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 SSC5DA1L4H1 1573 aa12.19□□□□□ -0.46
VIPAS39-211ENST00000557658 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 PIK3R2O00459 728 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 TXNDC9O14530 226 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 TPP1O14773 563 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 CASQ2O14958 399 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 GRAP2O75791 330 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 RAG1P15918 1043 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 DESP17661 470 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 PROZP22891 400 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 CHN2P52757 468 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 DEUP1Q05D60 604 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 DLG1Q12959 904 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 TNFAIP1Q13829 316 aa12.18□□□□□ -0.46
VIPAS39-211ENST00000557658 PCLAFQ15004 111 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms