RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 SMOC1Q9H4F8 434 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 CYP4F11Q9HBI6 524 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 XPNPEP1Q9NQW7 623 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 C2orf42Q9NWW7 574 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 SNTG2Q9NY99 539 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 ACTR10Q9NZ32 417 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 PRR13Q9NZ81 148 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 MAGEC2Q9UBF1 373 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 TNFRSF10DQ9UBN6 386 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 EBF1Q9UH73 591 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
ATXN3-247ENST00000557311 SLC8A2Q9UPR5 921 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 MSRB2Q9Y3D2 182 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 NEUROG3Q9Y4Z2 214 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 LAMA4Q16363 1823 aa5.29□□□□□ -1.56
ATXN3-247ENST00000557311 FRYLO94915 3013 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 BCLAF3A2AJT9 711 aaKnown RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SLC38A8A6NNN8 435 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SYN3O14994 580 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 N4BP3O15049 544 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SHOXO15266 292 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SH3BP5O60239 455 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SLITRK3O94933 977 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ZNF205O95201 554 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SEC24AO95486 1093 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TOP3BO95985 862 aaKnown RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 MYL4P12829 197 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 GLRA2P23416 452 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 IGFBP6P24592 240 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TKTP29401 623 aaKnown RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 HOXC13P31276 330 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 RDXP35241 583 aaKnown RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 CLCNKBP51801 687 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ARPP19P56211 112 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 AMPD2Q01433 879 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 CREB5Q02930 508 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 MESP2Q0VG99 397 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 GRSF1Q12849 480 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 CAPSQ13938 189 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 KRT32Q14532 448 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 PON2Q15165 354 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TEAD2Q15562 447 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ELF2Q15723 593 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 UPP1Q16831 310 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 FAM187BQ17R55 369 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ARHGAP29Q52LW3 1261 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ANKRD39Q53RE8 183 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 PPP4R3AQ6IN85 833 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TCEAL6Q6IPX3 200 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 GALNT17Q6IS24 598 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 GALNT18Q6P9A2 607 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 CD300LGQ6UXG3 332 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 C11orf74Q86VG3 221 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 FAM169BQ8N8A8 192 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 NUP43Q8NFH3 380 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 KCNN1Q92952 543 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TCEAL3Q969E4 200 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 INTS4Q96HW7 963 aaKnown RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TCEANC2Q96MN5 208 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TMEM209Q96SK2 561 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 LXNQ9BS40 222 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 G6PC3Q9BUM1 346 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SLC26A6Q9BXS9 759 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 RNF26Q9BY78 433 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 FZD8Q9H461 694 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SLC32A1Q9H598 525 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 SLITRK6Q9H5Y7 841 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 KCNMB3Q9NPA1 279 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TMEM9BQ9NQ34 198 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ASAH2Q9NR71 780 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ANKEF1Q9NU02 776 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 PRMT7Q9NVM4 692 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 OBP2AQ9NY56 170 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 RGL1Q9NZL6 768 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 CEP72Q9P209 647 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 AFF4Q9UHB7 1163 aaKnown RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 INSL5Q9Y5Q6 135 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 FASNP49327 2511 aaKnown RBP5.28□□□□□ -1.56
ATXN3-247ENST00000557311 COL4A3Q01955 1670 aa5.28□□□□□ -1.56
ATXN3-247ENST00000557311 DOCK8Q8NF50 2099 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 FAM221BA6H8Z2 402 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ANKRD62A6NC57 917 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 OR14I1A6ND48 311 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-247ENST00000557311 H0Y626 953 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 I3L4J1 428 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 ACKR2O00590 384 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 TBX3O15119 743 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 RECQL4O94761 1208 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 TRIM16O95361 564 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 LYPLA2O95372 231 aa5.27□□□□□ -1.57
ATXN3-247ENST00000557311 BAG4O95429 457 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms