RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RARGP13631 454 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 CCT8P50990 548 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 CFHR1Q03591 330 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
PSEN1-221ENST00000557293 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 ORC1Q13415 861 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 BMT2Q1RMZ1 405 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 GATAD2AQ86YP4 633 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 ZNF276Q8N554 614 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 C12orf29Q8N999 325 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 OR2T3Q8NH03 318 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 SNIP1Q8TAD8 396 aaKnown RBP13.2□□□□□ -0.3
PSEN1-221ENST00000557293 ZNF507Q8TCN5 953 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 SNX19Q92543 992 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 TSC1Q92574 1164 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 CCDC127Q96BQ5 260 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 NXPE2Q96DL1 559 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 DNMT3LQ9UJW3 386 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 COL5A1P20908 1838 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-221ENST00000557293 C10orf142B7Z368 130 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 ENC1O14682 589 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 CLIC2O15247 247 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 CD2BP2O95400 341 aaKnown RBP13.19□□□□□ -0.3
PSEN1-221ENST00000557293 VNN1O95497 513 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 WNT1P04628 370 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 EPHX1P07099 455 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 CD27P26842 260 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 TEAD4Q15561 434 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 FBXL19Q6PCT2 694 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 LRRC69Q6ZNQ3 347 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 CLEC20AQ6ZU45 233 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 GPR155Q7Z3F1 870 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 SYAP1Q96A49 352 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-221ENST00000557293 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 NRSN2Q9GZP1 204 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 LHX5Q9H2C1 402 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 TMEM245Q9H330 911 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 EBF2Q9HAK2 575 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 AGPAT3Q9NRZ7 376 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 FTSJ1Q9UET6 329 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 NAV2Q8IVL1 2488 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 MYLKQ15746 1914 aa13.19□□□□□ -0.3
PSEN1-221ENST00000557293 TEX51A0A1B0GUA7 166 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 LDOC1O95751 146 aaPredicted RBP13.18□□□□□ -0.3
PSEN1-221ENST00000557293 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
PSEN1-221ENST00000557293 IGHV4-34P06331 123 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 C1SP09871 688 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 CASP4P49662 377 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 RPS14P62263 151 aaKnown RBP13.18□□□□□ -0.3
PSEN1-221ENST00000557293 TLE3Q04726 772 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 TRPC3Q13507 836 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 C10orf120Q5SQS8 335 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 ZNF366Q8N895 744 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 AGO1Q9UL18 857 aaKnown RBP13.18□□□□□ -0.3
PSEN1-221ENST00000557293 AK5Q9Y6K8 562 aa13.18□□□□□ -0.3
PSEN1-221ENST00000557293 MGAQ8IWI9 3026 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 VILLO15195 856 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 TIMM44O43615 452 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 DFNA5O60443 496 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 FSBPO95073 299 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 SEMA4FO95754 770 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 CHKAP35790 457 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 ACADVLP49748 655 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 CYP2J2P51589 502 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 KIF11P52732 1056 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 NDST1P52848 882 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 CLDN10P78369 228 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 GOLGA8FQ08AF8 430 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 GOLGA8DPQ0D2H9 430 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 EIF4HQ15056 248 aaKnown RBP13.17□□□□□ -0.3
PSEN1-221ENST00000557293 ZNF667Q5HYK9 610 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 C6orf118Q5T5N4 469 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 ANKS1BQ7Z6G8 1248 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 KIAA0907Q7Z7F0 614 aaPredicted RBP13.17□□□□□ -0.3
PSEN1-221ENST00000557293 FAM217AQ8IXS0 508 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 ZC3H3Q8IXZ2 948 aaKnown RBP13.17□□□□□ -0.3
PSEN1-221ENST00000557293 XXYLT1Q8NBI6 393 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 SAP25Q8TEE9 199 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 FGF11Q92914 225 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
PSEN1-221ENST00000557293 HNRNPABQ99729 332 aaKnown RBP13.17□□□□□ -0.3
PSEN1-221ENST00000557293 SLC2A11Q9BYW1 496 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 PRSS16Q9NQE7 514 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 USP3Q9Y6I4 520 aa13.17□□□□□ -0.3
PSEN1-221ENST00000557293 MYO18BQ8IUG5 2567 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 CAPN9O14815 690 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 WNT9AO14904 365 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.3
PSEN1-221ENST00000557293 RRP8O43159 456 aaKnown RBP13.16□□□□□ -0.3
PSEN1-221ENST00000557293 EIF5BO60841 1220 aaKnown RBP13.16□□□□□ -0.3
PSEN1-221ENST00000557293 RFPL3O75679 317 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms