RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 LRRC4Q9HBW1 653 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 OLA1Q9NTK5 396 aaKnown RBP16.64■□□□□ 0.25
TUBB3-213ENST00000557262 THAP10Q9P2Z0 257 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-213ENST00000557262 HOOK1Q9UJC3 728 aaKnown RBP16.64■□□□□ 0.25
TUBB3-213ENST00000557262 STON1Q9Y6Q2 735 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 PLXND1Q9Y4D7 1925 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 ATXN2Q99700 1313 aaKnown RBP16.64■□□□□ 0.25
TUBB3-213ENST00000557262 TULP2O00295 520 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 NDUFS2O75306 463 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 VDRP11473 427 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 CD19P15391 556 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 TBXAS1P24557 533 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 MAPK8P45983 427 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 GFPT1Q06210 699 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 BST2Q10589 180 aaKnown RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 STARD3Q14849 445 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 GEN1Q17RS7 908 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 METTL3Q86U44 580 aaKnown RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 SLC41A1Q8IVJ1 513 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 UBA3Q8TBC4 463 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 ERCC4Q92889 916 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 PLD4Q96BZ4 506 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 ZNF419Q96HQ0 510 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 PIWIL1Q96J94 861 aaKnown RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 SLC2A11Q9BYW1 496 aa16.63■□□□□ 0.25
TUBB3-213ENST00000557262 METTL14Q9HCE5 456 aaKnown RBP16.63■□□□□ 0.25
TUBB3-213ENST00000557262 TRIM49BA6NDI0 452 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 TIMM44O43615 452 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 HARS2P49590 506 aaKnown RBP16.62■□□□□ 0.25
TUBB3-213ENST00000557262 ATXN3P54252 364 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-213ENST00000557262 NUCB2P80303 420 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 ZNF252P-AS1Q0IIN9 211 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 LRMPQ12912 555 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 ENPP2Q13822 863 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 TRIP4Q15650 581 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-213ENST00000557262 BSPRYQ5W0U4 402 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 KIAA1324Q6UXG2 1013 aaKnown RBP16.62■□□□□ 0.25
TUBB3-213ENST00000557262 BHLHA9Q7RTU4 235 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 FMNL3Q8IVF7 1028 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 FAM217AQ8IXS0 508 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 UBR7Q8N806 425 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 TRIML1Q8N9V2 468 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 DDI1Q8WTU0 396 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 RNF139Q8WU17 664 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 KCTD13Q8WZ19 329 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 DHTKD1Q96HY7 919 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-213ENST00000557262 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
TUBB3-213ENST00000557262 SLC6A17Q9H1V8 727 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 SLC32A1Q9H598 525 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 CAPN10Q9HC96 672 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 ELOVL2Q9NXB9 296 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 CLEC4EQ9ULY5 219 aa16.62■□□□□ 0.25
TUBB3-213ENST00000557262 HBS1LQ9Y450 684 aaKnown RBP16.62■□□□□ 0.25
TUBB3-213ENST00000557262 TNRC6BQ9UPQ9 1833 aaKnown RBP16.61■□□□□ 0.25
TUBB3-213ENST00000557262 SETSIPP0DME0 302 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 IL12RB1P42701 662 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 FMO5P49326 533 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 ADIGQ0VDE8 80 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 STIM1Q13586 685 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 EIF4HQ15056 248 aaKnown RBP16.61■□□□□ 0.25
TUBB3-213ENST00000557262 FUT11Q495W5 492 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 MPPE1Q53F39 396 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 SYCP2LQ5T4T6 812 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 ANKS1BQ7Z6G8 1248 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 ELOA2Q8IYF1 753 aaPredicted RBP16.61■□□□□ 0.25
TUBB3-213ENST00000557262 SCML4Q8N228 414 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 DEFB124Q8NES8 71 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 FOXJ1Q92949 421 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 HSPA12BQ96MM6 686 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 CEP63Q96MT8 703 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 PRDM16Q9HAZ2 1276 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 SFMBT1Q9UHJ3 866 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 PI4KAP42356 2102 aa16.61■□□□□ 0.25
TUBB3-213ENST00000557262 YJEFN3A6XGL0 299 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 UPK3BL1B0FP48 263 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 UPK3BL2E5RIL1 263 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 E7ENQ6 273 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 O00370 1275 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 ARHGAP33O14559 1287 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 PSMA7O14818 248 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 PMM2O15305 246 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 SYNCRIPO60506 623 aaKnown RBP16.6■□□□□ 0.25
TUBB3-213ENST00000557262 PAEPP09466 180 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 CD6P30203 668 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 PPP1R2P41236 205 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 SEMA3BQ13214 749 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 BECN1Q14457 450 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 PKDCCQ504Y2 493 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 LCLAT1Q6UWP7 414 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 TMPRSS6Q8IU80 811 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 RGL4Q8IZJ4 473 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 SIX6OS1Q8N1H7 587 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 HDDC3Q8N4P3 179 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 EDEM1Q92611 657 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 TMA16Q96EY4 203 aaKnown RBP16.6■□□□□ 0.25
TUBB3-213ENST00000557262 NT5C1BQ96P26 610 aa16.6■□□□□ 0.25
TUBB3-213ENST00000557262 GTPBP2Q9BX10 602 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms