RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 SRRM3A6NNA2 597 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 WASH3PC4AMC7 463 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 CILPO75339 1184 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 STC2O76061 302 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 RARGP13631 454 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 ACO1P21399 889 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 NR2F2P24468 414 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 ADORA2BP29275 332 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 PLA2G4AP47712 749 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 DGKGP49619 791 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 SIM1P81133 766 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 CCDC186Q7Z3E2 898 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 RABEPKQ7Z6M1 372 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 METTL3Q86U44 580 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 MINDY1Q8N5J2 469 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 RBBP8NLQ8NC74 664 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 OR2I1PQ8NGU4 316 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 NELFBQ8WX92 580 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 HSPA12BQ96MM6 686 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 CYP3A43Q9HB55 503 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 CACNA2D2Q9NY47 1150 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 DNMT3LQ9UJW3 386 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 NUDT5Q9UKK9 219 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 CYP8B1Q9UNU6 501 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 SLC27A6Q9Y2P4 619 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 RAD54BQ9Y620 910 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 AKAP13Q12802 2813 aa11.27□□□□□ -0.61
HNRNPC-230ENST00000557201 ADAMTS9Q9P2N4 1935 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 CACNA1EQ15878 2313 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 CETN3O15182 167 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 OPHN1O60890 802 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 PIK3CAP42336 1068 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 VAMP7P51809 220 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 ENPEPQ07075 957 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 PPP3CAQ08209 521 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 GOLGA8FQ08AF8 430 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 GOLGA8DPQ0D2H9 430 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 STX1AQ16623 288 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 ZSCAN23Q3MJ62 389 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 FYB2Q5VWT5 728 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 SDE2Q6IQ49 451 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 KLHL10Q6JEL2 608 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 HDDC3Q8N4P3 179 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 TAS1R2Q8TE23 839 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 DNASE2BQ8WZ79 361 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 ERLEC1Q96DZ1 483 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 CEP63Q96MT8 703 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 MED15Q96RN5 788 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 GTPBP2Q9BX10 602 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 DUSP16Q9BY84 665 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.26□□□□□ -0.612e-7■■■■■ 31.7
HNRNPC-230ENST00000557201 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 CLIC5Q9NZA1 410 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 LSM7Q9UK45 103 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 FRMD4BQ9Y2L6 1034 aa11.26□□□□□ -0.61
HNRNPC-230ENST00000557201 DMXL2Q8TDJ6 3036 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 IGF2RP11717 2491 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 FREM2Q5SZK8 3169 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 TRIM49BA6NDI0 452 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 SLC16A3O15427 465 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 C7P10643 843 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 PSMC2P35998 433 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 IL12RB1P42701 662 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 ATXN3P54252 364 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 MFAP3P55082 362 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 TYRO3Q06418 890 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 SLC14A1Q13336 389 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 FUT11Q495W5 492 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 C10orf120Q5SQS8 335 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 PPP1R26Q5T8A7 1209 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 CEP135Q66GS9 1140 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 RAB44Q7Z6P3 723 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 ZCCHC14Q8WYQ9 949 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 JAKMIP2Q96AA8 810 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 PIWIL1Q96J94 861 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 FUCA2Q9BTY2 467 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 NIF3L1Q9GZT8 377 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 MKRN2Q9H000 416 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 USP36Q9P275 1121 aaKnown RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 THAP10Q9P2Z0 257 aaPredicted RBP11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 CTNND2Q9UQB3 1225 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 NFE2L3Q9Y4A8 694 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 STON1Q9Y6Q2 735 aa11.25□□□□□ -0.61
HNRNPC-230ENST00000557201 SYCE3A1L190 88 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 KCNJ18B7U540 433 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 H0Y626 953 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 TAF4O00268 1085 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 ZBTB24O43167 697 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 CLSTN1O94985 981 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 TRIM16O95361 564 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 FGFR1OPO95684 399 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 IGLV3-19P01714 112 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 SYPP08247 313 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 TRIM49P0CI25 452 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 TRIM49CP0CI26 452 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 CD6P30203 668 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 GCLMP48507 274 aa11.24□□□□□ -0.61
HNRNPC-230ENST00000557201 ZNF132P52740 706 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms