RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ABCB6Q9NP58 842 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 ZNHIT6Q9NWK9 470 aaKnown RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TRMT1Q9NXH9 659 aaKnown RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TRIM10Q9UDY6 481 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 CHORDC1Q9UHD1 332 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 ADAMTS1Q9UHI8 967 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 GTF3C4Q9UKN8 822 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 MYO6Q9UM54 1294 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 BARX2Q9UMQ3 279 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 NENFQ9UMX5 172 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 USP15Q9Y4E8 981 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 EPN1Q9Y6I3 576 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 ARID1BQ8NFD5 2236 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TDRD15B5MCY1 1934 aaKnown RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TSC2P49815 1807 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 KIAA1671Q9BY89 1806 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 REV3LO60673 3130 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 H3BRJ5 948 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 M0QYV0 167 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 O00370 1275 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 AKR1B10O60218 316 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SOAT2O75908 522 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 FGF18O76093 207 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 NDUFA10O95299 355 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SOD2P04179 222 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CYP11A1P05108 521 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 PAEPP09466 180 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 VDRP11473 427 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 LAG3P18627 525 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TYMPP19971 482 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 ITPKAP23677 461 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CA8P35219 290 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 MAGEA1P43355 309 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 NRIP1P48552 1158 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 ALDH7A1P49419 539 aaKnown RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 GPR15P49685 360 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 RGS7P49802 495 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 ERVFC1P60507 584 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 YWHAEP62258 255 aaKnown RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CDK17Q00537 523 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CDR2Q01850 454 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 YWHAHQ04917 246 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 MRPL58Q14197 206 aaKnown RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CLEC16AQ2KHT3 1053 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SLC39A12Q504Y0 691 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CCDC122Q5T0U0 273 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SDHAF4Q5VUM1 108 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 NAA35Q5VZE5 725 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 FAM43BQ6ZT52 329 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 UNC93AQ86WB7 457 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 METTL23Q86XA0 190 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 UBALD2Q8IYN6 164 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 FUKQ8N0W3 1084 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CRYBG2Q8N1P7 616 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM86AQ8N2M4 240 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 B3GALNT2Q8NCR0 500 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 C1orf131Q8NDD1 294 aaKnown RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 FEZF2Q8TBJ5 459 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SLC2A14Q8TDB8 520 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 MICAL1Q8TDZ2 1067 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CPA5Q8WXQ8 436 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 RIN2Q8WYP3 895 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SUSD6Q92537 303 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 NDRG1Q92597 394 aaKnown RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SECISBP2LQ93073 1101 aaKnown RBP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 ARHGEF26Q96DR7 871 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 FAM81BQ96LP2 452 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 CCDC42Q96M95 316 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 PGLYRP2Q96PD5 576 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 MED10Q9BTT4 135 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 HERC2P3Q9BVR0 1158 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF518BQ9C0D4 1074 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 PDCL3Q9H2J4 239 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 DEF6Q9H4E7 631 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TLE6Q9H808 572 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM30AQ9NV96 361 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 SPG21Q9NZD8 308 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TSPAN16Q9UKR8 245 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-244ENST00000556898 DAAM1Q9Y4D1 1078 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 BRWD1Q9NSI6 2320 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 GBF1Q92538 1859 aa5.6□□□□□ -1.51
ATXN3-244ENST00000556898 TRANK1O15050 2925 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 SF3B1O75533 1304 aaKnown RBP eCLIP5.59□□□□□ -1.514e-12■■■■■ 275.7
ATXN3-244ENST00000556898 SSU72P8A0A1W2PR75 194 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 WDR27A2RRH5 827 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 EIF3CLB5ME19 914 aaKnown RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 SYN3O14994 580 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ARHGAP6O43182 974 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 TBC1D4O60343 1298 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 OAZ2O95190 189 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CYP1A1P04798 512 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 SPATA31D3P0C874 917 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 UNGP13051 313 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-244ENST00000556898 ABCB4P21439 1286 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 BDNFP23560 247 aa5.59□□□□□ -1.51
ATXN3-244ENST00000556898 CYP2F1P24903 491 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms