RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 A0A0A0MRY4 1105 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 K7EQS6 105 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 HSF2BPO75031 334 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 ATG13O75143 517 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 SERPINC1P01008 464 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 PENKP01210 267 aaPredicted RBP23.82■■□□□ 1.4
TDP1-216ENST00000556867 GABRB2P47870 512 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 TBX4P57082 545 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 NOMO3P69849 1222 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 KDSRQ06136 332 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 TAF5Q15542 800 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 PREPLQ4J6C6 727 aaPredicted RBP23.82■■□□□ 1.4
TDP1-216ENST00000556867 OR6B2Q6IFH4 312 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 SLC26A9Q7LBE3 791 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 CACNA2D4Q7Z3S7 1137 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 TAC4Q86UU9 113 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 NAT16Q8N8M0 369 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 XPO6Q96QU8 1125 aaKnown RBP23.82■■□□□ 1.4
TDP1-216ENST00000556867 FAM126AQ9BYI3 521 aaPredicted RBP23.82■■□□□ 1.4
TDP1-216ENST00000556867 TLR6Q9Y2C9 796 aa23.82■■□□□ 1.4
TDP1-216ENST00000556867 GOLGA6L19H0YKK7 550 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 IGLV3-25P01717 112 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 CHRNB2P17787 502 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 FMO1Q01740 532 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 SLC6A3Q01959 620 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 NFKBIBQ15653 356 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 TSSK4Q6SA08 328 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 UNC45BQ8IWX7 931 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 ZNF397Q8NF99 534 aaPredicted RBP23.81■■□□□ 1.4
TDP1-216ENST00000556867 RPLP0P6Q8NHW5 317 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 P2RY11Q96G91 374 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 SLC39A13Q96H72 371 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 FCRL2Q96LA5 508 aaPredicted RBP23.81■■□□□ 1.4
TDP1-216ENST00000556867 PHOX2BQ99453 314 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 DNAJC17Q9NVM6 304 aaKnown RBP23.81■■□□□ 1.4
TDP1-216ENST00000556867 C2orf42Q9NWW7 574 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 MYO6Q9UM54 1294 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 VPS13AQ96RL7 3174 aa23.81■■□□□ 1.4
TDP1-216ENST00000556867 PROB1E7EW31 1015 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 GFRA2O00451 464 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 CYP1A1P04798 512 aaPredicted RBP23.8■■□□□ 1.4
TDP1-216ENST00000556867 CHRM1P11229 460 aaPredicted RBP23.8■■□□□ 1.4
TDP1-216ENST00000556867 SCNN1AP37088 669 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 TNFRSF4P43489 277 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 ZNF445P59923 1031 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 FANCCQ00597 558 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 NR1I3Q14994 352 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 FYB2Q5VWT5 728 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 NAA35Q5VZE5 725 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 GRAMD4Q6IC98 578 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 ZC3H14Q6PJT7 736 aaKnown RBP23.8■■□□□ 1.4
TDP1-216ENST00000556867 TRIM72Q6ZMU5 477 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 ERICH1Q86X53 443 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 SFTPA1Q8IWL2 248 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 TERB1Q8NA31 727 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 MSANTD4Q8NCY6 345 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 USP33Q8TEY7 942 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 AZIN2Q96A70 460 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 ACDQ96AP0 544 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 C18orf8Q96DM3 657 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 FBXO10Q9UK96 956 aa23.8■■□□□ 1.4
TDP1-216ENST00000556867 MYO18AQ92614 2054 aaKnown RBP23.8■■□□□ 1.4
TDP1-216ENST00000556867 K7ESF4 209 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 IRAK2O43187 625 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 DAB1O75553 588 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 TRUB2O95900 331 aaKnown RBP23.79■■□□□ 1.4
TDP1-216ENST00000556867 CYBBP04839 570 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 DCAF6Q58WW2 860 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 ADGRF1Q5T601 910 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 DEFB106AQ8N104 65 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 ADAM32Q8TC27 787 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 BAP1Q92560 729 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 BHMTQ93088 406 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 ZSCAN32Q9NX65 697 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 PLK2Q9NYY3 685 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 PCDHGA2Q9Y5H1 932 aa23.79■■□□□ 1.4
TDP1-216ENST00000556867 GRAP2O75791 330 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 HOXA6P31267 233 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 SLC11A2P49281 568 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 NRLP54845 237 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 SEC13P55735 322 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 PITX1P78337 314 aaPredicted RBP23.78■■□□□ 1.4
TDP1-216ENST00000556867 MRPS21P82921 87 aaKnown RBP23.78■■□□□ 1.4
TDP1-216ENST00000556867 CDK17Q00537 523 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 EIF4EBP2Q13542 120 aaPredicted RBP23.78■■□□□ 1.4
TDP1-216ENST00000556867 NUDT18Q6ZVK8 323 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 SYT13Q7L8C5 426 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 XYLT1Q86Y38 959 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 ZBTB44Q8NCP5 570 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 CPA5Q8WXQ8 436 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 IRX2Q9BZI1 471 aaPredicted RBP23.78■■□□□ 1.4
TDP1-216ENST00000556867 R4GN57 208 aa23.78■■□□□ 1.4
TDP1-216ENST00000556867 TBC1D3BA6NDS4 549 aa23.77■■□□□ 1.4
TDP1-216ENST00000556867 TRIM24O15164 1050 aa23.77■■□□□ 1.4
TDP1-216ENST00000556867 ACSL4O60488 711 aa23.77■■□□□ 1.4
TDP1-216ENST00000556867 CISD3P0C7P0 127 aa23.77■■□□□ 1.4
TDP1-216ENST00000556867 CCDC172P0C7W6 258 aa23.77■■□□□ 1.4
TDP1-216ENST00000556867 FERP16591 822 aa23.77■■□□□ 1.4
TDP1-216ENST00000556867 KIR2DL1P43626 348 aaPredicted RBP23.77■■□□□ 1.4
TDP1-216ENST00000556867 DGKGP49619 791 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms