RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SPATA32Q96LK8 384 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 MARCH2Q9P0N8 246 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 TRAF3IP3Q9Y228 551 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 MSRB2Q9Y3D2 182 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 PCDHB9Q9Y5E1 797 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 PLXNB3Q9ULL4 1909 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 KNL1Q8NG31 2342 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 FREM2Q5SZK8 3169 aa15.5■□□□□ 0.07
CHD8-211ENST00000556833 PTPRBP23467 1997 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 TMEM8BA6NDV4 472 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 GOLGA8CPA6NN73 597 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 SYNCRIPO60506 623 aaKnown RBP15.49■□□□□ 0.07
CHD8-211ENST00000556833 PENKP01210 267 aaPredicted RBP15.49■□□□□ 0.07
CHD8-211ENST00000556833 EPHX1P07099 455 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 FTH1P19P0C7X4 201 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 GNSP15586 552 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 TPMTP51580 245 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 YWHAGP61981 247 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHD8-211ENST00000556833 ADAM9Q13443 819 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 TRIP6Q15654 476 aaKnown RBP15.49■□□□□ 0.07
CHD8-211ENST00000556833 GOLGA7BQ2TAP0 167 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 WDR45BQ5MNZ6 344 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 KLHDC10Q6PID8 442 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 INTS8Q75QN2 995 aaKnown RBP15.49■□□□□ 0.07
CHD8-211ENST00000556833 ANKS1BQ7Z6G8 1248 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 TADA2BQ86TJ2 420 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 PIGZQ86VD9 579 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 TMPRSS6Q8IU80 811 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 SLC4A11Q8NBS3 891 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 SETD7Q8WTS6 366 aaKnown RBP15.49■□□□□ 0.07
CHD8-211ENST00000556833 CYB5D2Q8WUJ1 264 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 TATDN2Q93075 761 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 SIPA1Q96FS4 1042 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 ULBP1Q9BZM6 244 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 TMEM8AQ9HCN3 771 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 PNPLA8Q9NP80 782 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 CISHQ9NSE2 258 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 DNAAF2Q9NVR5 837 aaKnown RBP15.49■□□□□ 0.07
CHD8-211ENST00000556833 THAP10Q9P2Z0 257 aaPredicted RBP15.49■□□□□ 0.07
CHD8-211ENST00000556833 SLCO1B1Q9Y6L6 691 aa15.49■□□□□ 0.07
CHD8-211ENST00000556833 UPK3BL1B0FP48 263 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 UPK3BL2E5RIL1 263 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 GFRA2O00451 464 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 CYBBP04839 570 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 CMA1P23946 247 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 PSMC2P35998 433 aaKnown RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 MXI1P50539 228 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 TKTL1P51854 596 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 RAD23BP54727 409 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 COG7P83436 770 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 ARID5AQ03989 594 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 RING1Q06587 406 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 DCAF17Q5H9S7 520 aaPredicted RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 TMEM215Q68D42 235 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 LAYNQ6UX15 382 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 SERPINA13PQ6UXR4 307 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 MARCH9Q86YJ5 346 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 UCMAQ8WVF2 138 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 EDEM1Q92611 657 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 FOXJ1Q92949 421 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 CCDC47Q96A33 483 aaKnown RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 PIWIL1Q96J94 861 aaKnown RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 GOLPH3LQ9H4A5 285 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 FAM124BQ9H5Z6 455 aaPredicted RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 WSB2Q9NYS7 404 aaPredicted RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 USP36Q9P275 1121 aaKnown RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 SUSD2Q9UGT4 822 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 SFMBT1Q9UHJ3 866 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 EIF2B4Q9UI10 523 aaKnown RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 FBXO10Q9UK96 956 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 STRIP2Q9ULQ0 834 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 LHX6Q9UPM6 363 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 HPSEQ9Y251 543 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 USP3Q9Y6I4 520 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 MUC22E2RYF6 1773 aaPredicted RBP15.48■□□□□ 0.07
CHD8-211ENST00000556833 ITPR1Q14643 2758 aa15.48■□□□□ 0.07
CHD8-211ENST00000556833 TAF4O00268 1085 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 PIK3R2O00459 728 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 MSI1O43347 362 aaKnown RBP15.47■□□□□ 0.07
CHD8-211ENST00000556833 GJB3O75712 270 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 RHOBTB3O94955 611 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 ACADMP11310 421 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 RDXP35241 583 aaKnown RBP15.47■□□□□ 0.07
CHD8-211ENST00000556833 CHKAP35790 457 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 PSEN1P49768 467 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 COPAP53621 1224 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 DPYDQ12882 1025 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 FNDC3BQ53EP0 1204 aaKnown RBP15.47■□□□□ 0.07
CHD8-211ENST00000556833 TCERG1LQ5VWI1 586 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 KRT39Q6A163 491 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 ATL3Q6DD88 541 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 C19orf48Q6RUI8 117 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 RAB44Q7Z6P3 723 aaPredicted RBP15.47■□□□□ 0.07
CHD8-211ENST00000556833 FMNL3Q8IVF7 1028 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 PRCCQ92733 491 aaPredicted RBP15.47■□□□□ 0.07
CHD8-211ENST00000556833 TMEM176AQ96HP8 235 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 DCLK3Q9C098 648 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 GAREM1Q9H706 876 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 ELOVL2Q9NXB9 296 aa15.47■□□□□ 0.07
CHD8-211ENST00000556833 CLIC5Q9NZA1 410 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms