RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 THAP12O43422 761 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 FBXO21O94952 628 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 EPN2O95208 641 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 DGKGP49619 791 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 DGKEP52429 567 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 PDCLQ13371 301 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 KCNJ12Q14500 433 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 ARHGAP44Q17R89 818 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 VWA3BQ502W6 1294 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 CT47A1Q5JQC4 288 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-224ENST00000556737 CDKAL1Q5VV42 579 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 RNF43Q68DV7 783 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 ANO7Q6IWH7 933 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 C11orf57Q6ZUT1 292 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-224ENST00000556737 CACNA2D4Q7Z3S7 1137 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 CREBRFQ8IUR6 639 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 FAM114A1Q8IWE2 563 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 ZNF513Q8N8E2 541 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-224ENST00000556737 STK32AQ8WU08 396 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 RNF139Q8WU17 664 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 ZNF606Q8WXB4 792 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 RMDN1Q96DB5 314 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 PIWIL1Q96J94 861 aaKnown RBP10.78□□□□□ -0.68
SHMT2-224ENST00000556737 ZC3H10Q96K80 434 aaKnown RBP10.78□□□□□ -0.68
SHMT2-224ENST00000556737 FAM81BQ96LP2 452 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 XPO6Q96QU8 1125 aaKnown RBP10.78□□□□□ -0.68
SHMT2-224ENST00000556737 ACOX2Q99424 681 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 MIS12Q9H081 205 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 DUSP15Q9H1R2 295 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-224ENST00000556737 CLEC4EQ9ULY5 219 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 SLC27A6Q9Y2P4 619 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 A0A1W2PQF6 199 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 E5RJQ4 531 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 PAPSS1O43252 624 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 MED7O43513 233 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 LRP3O75074 770 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 LATS1O95835 1130 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 PRKCSHP14314 528 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 BCKDHBP21953 392 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 EEF1GP26641 437 aaKnown RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 HOXD9P28356 352 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 CHKAP35790 457 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 SGSHP51688 502 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 SPEM2Q0P670 501 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 KCNMA1Q12791 1236 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 GEN1Q17RS7 908 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 PLK5Q496M5 336 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 PREPLQ4J6C6 727 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 FAM133BQ5BKY9 247 aaKnown RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 TCP11X2Q5H9J9 407 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 EOGTQ5NDL2 527 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 TMEM110Q86TL2 294 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 GAS2L3Q86XJ1 694 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 WDTC1Q8N5D0 677 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 GPR161Q8N6U8 529 aaKnown RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 KCNV2Q8TDN2 545 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 DQX1Q8TE96 717 aaKnown RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 PRICKLE1Q96MT3 831 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 GABRG3Q99928 467 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 FUCA2Q9BTY2 467 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 NAA15Q9BXJ9 866 aaKnown RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 DNAJC12Q9UKB3 198 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 PCDHGC3Q9UN70 934 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 NFE2L3Q9Y4A8 694 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 FHOD1Q9Y613 1164 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.77□□□□□ -0.69
SHMT2-224ENST00000556737 CKAP5Q14008 2032 aa10.77□□□□□ -0.69
SHMT2-224ENST00000556737 TCRBV21S2A2A0A5A6 115 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 GOLGA6L19H0YKK7 550 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 FOXN3O00409 490 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-224ENST00000556737 IGLV3-25P01717 112 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 HOXB2P14652 356 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 GABRG2P18507 467 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 CLCN1P35523 988 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 P2RY2P41231 377 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 WASP42768 502 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 ACADSBP45954 432 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 ID4P47928 161 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 ZNF165P49910 485 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 RING1Q06587 406 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 NNTQ13423 1086 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 TMEM215Q68D42 235 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 NADSYN1Q6IA69 706 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 BEND5Q7L4P6 421 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 TRMT11Q7Z4G4 463 aaKnown RBP10.76□□□□□ -0.69
SHMT2-224ENST00000556737 TAC4Q86UU9 113 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 SLC47A2Q86VL8 602 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 PASD1Q8IV76 773 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 SCUBE3Q8IX30 993 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 FAM71AQ8IYT1 594 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 ENOX1Q8TC92 643 aaKnown RBP10.76□□□□□ -0.69
SHMT2-224ENST00000556737 MYEOVQ96EZ4 313 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 SLC39A13Q96H72 371 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 LOXL4Q96JB6 756 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 FCRL2Q96LA5 508 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-224ENST00000556737 CPXM1Q96SM3 734 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 RBSNQ9H1K0 784 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 GANQ9H2C0 597 aa10.76□□□□□ -0.69
SHMT2-224ENST00000556737 POLMQ9NP87 494 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms