RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ALDH1A2O94788 518 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 SEC24DO94855 1032 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-243ENST00000556671 CLSTN1O94985 981 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 CD4P01730 458 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ITGB8P26012 769 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 SETQ01105 290 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-243ENST00000556671 CD69Q07108 199 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ST3GAL1Q11201 340 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 PPFIA1Q13136 1202 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ITGB3BPQ13352 177 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-243ENST00000556671 PPIGQ13427 754 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ZRSR1Q15695 479 aaKnown RBP5.2□□□□□ -1.58
ATXN3-243ENST00000556671 CALCRLQ16602 461 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 EARS2Q5JPH6 523 aaKnown RBP5.2□□□□□ -1.58
ATXN3-243ENST00000556671 SDE2Q6IQ49 451 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ESPNLQ6ZVH7 1005 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ZNF365Q70YC5 407 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 NIPA1Q7RTP0 329 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ANKRD33Q7Z3H0 272 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 TPH2Q8IWU9 490 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ZNF276Q8N554 614 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 DNAJB3Q8WWF6 145 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 NINJ1Q92982 152 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ZBTB10Q96DT7 871 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 NAP1L4Q99733 375 aaKnown RBP5.2□□□□□ -1.58
ATXN3-243ENST00000556671 C16orf70Q9BSU1 422 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 TTPALQ9BTX7 342 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 SEZ6LQ9BYH1 1024 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 UNC45AQ9H3U1 944 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 FANCLQ9NW38 375 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 MSRAQ9UJ68 235 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 PCDHA12Q9UN75 941 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 GINS2Q9Y248 185 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 PCDHA10Q9Y5I2 948 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 TRIOBPQ9H2D6 2365 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 NFASCO94856 1347 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 UMODL1Q5DID0 1318 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 IGLV3-22A0A075B6J6 115 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 RRN3P2A6NIE6 340 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 RSPH10B2B2RC85 870 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 M0QZ92 97 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 HOXA3O43365 443 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-243ENST00000556671 SLC37A4O43826 429 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 LY86O95711 162 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 CCNE2O96020 404 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 PFKMP08237 780 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 RSPH10BP0C881 870 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 ACTN1P12814 892 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 HK1P19367 917 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 NR4A1P22736 598 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 KLRC1P26715 233 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 CIITAP33076 1130 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 TECP42680 631 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 KPNA1P52294 538 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-243ENST00000556671 PHC1P78364 1004 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 CEBPZQ03701 1054 aaKnown RBP5.19□□□□□ -1.58
ATXN3-243ENST00000556671 CTTNQ14247 550 aaKnown RBP5.19□□□□□ -1.58
ATXN3-243ENST00000556671 PLCB4Q15147 1175 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 FAM214AQ32MH5 1076 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 Q4G0T1 1027 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 C9orf50Q5SZB4 431 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 ZNF618Q5T7W0 954 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 ABHD15Q6UXT9 468 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 RSPH3Q86UC2 560 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 TDHQ8IZJ6 230 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 FBXO18Q8NFZ0 1043 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 SLC5A5Q92911 643 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 IL17RAQ96F46 866 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 ZNF668Q96K58 619 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-243ENST00000556671 CCDC43Q96MW1 224 aaKnown RBP5.19□□□□□ -1.58
ATXN3-243ENST00000556671 SCLT1Q96NL6 688 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 GDF15Q99988 308 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 SH2D3AQ9BRG2 576 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 TTC12Q9H892 705 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-243ENST00000556671 NRCAMQ92823 1304 aa5.19□□□□□ -1.58
ATXN3-243ENST00000556671 CITO14578 2027 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 FNDC1Q4ZHG4 1894 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-243ENST00000556671 CYP3A7-CYP3A51PA0A087WV96 503 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 KIF28PB7ZC32 967 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 HAS3O00219 553 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 EDIL3O43854 480 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 HBP1O60381 514 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 NEMFO60524 1076 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 IQCF3P0C7M6 154 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 CKBP12277 381 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 GCFC2P16383 781 aaKnown RBP5.18□□□□□ -1.58
ATXN3-243ENST00000556671 PDCP20941 246 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 CYP3A7P24462 503 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 HSD3B2P26439 372 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 SFNP31947 248 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 GPR15P49685 360 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 JAK3P52333 1124 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
ATXN3-243ENST00000556671 CYP4A11Q02928 519 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 COL10A1Q03692 680 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 PCBP1Q15365 356 aaKnown RBP eCLIP5.18□□□□□ -1.58
ATXN3-243ENST00000556671 NPY5RQ15761 445 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 TMEM266Q2M3C6 531 aa5.18□□□□□ -1.58
ATXN3-243ENST00000556671 XKR9Q5GH70 373 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms