RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 ANO7Q6IWH7 933 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 KLHL10Q6JEL2 608 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 KLHDC10Q6PID8 442 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 TPGS1Q6ZTW0 290 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 RSRC2Q7L4I2 434 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 GPRIN1Q7Z2K8 1008 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CCDC186Q7Z3E2 898 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 C12orf40Q86WS4 652 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 MIB1Q86YT6 1006 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 ZC3H3Q8IXZ2 948 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 ALLCQ8N6M5 410 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 ZNF513Q8N8E2 541 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 ANKRD52Q8NB46 1076 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 SLC4A11Q8NBS3 891 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 TXNDC5Q8NBS9 432 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 EZH1Q92800 747 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 SEMA4DQ92854 862 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 FOXJ1Q92949 421 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CCDC97Q96F63 343 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 ZC3H10Q96K80 434 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 SPACA7Q96KW9 195 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CEP63Q96MT8 703 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 BBS2Q9BXC9 721 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 UBXN6Q9BZV1 441 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 DCLK3Q9C098 648 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 NMUR1Q9HB89 426 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 LRRC4Q9HBW1 653 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 DNAJC17Q9NVM6 304 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 POLR3BQ9NW08 1133 aaPredicted RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 CLIC5Q9NZA1 410 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 BCCIPQ9P287 314 aaKnown RBP eCLIP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 WDR35Q9P2L0 1181 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 RASAL2Q9UJF2 1139 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 STRIP2Q9ULQ0 834 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 ZNF510Q9Y2H8 683 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 COQ4Q9Y3A0 265 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 PCDHGA5Q9Y5G8 931 aa8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 RIF1Q5UIP0 2472 aaKnown RBP8.08□□□□□ -1.12
HNRNPC-226ENST00000556628 A0A0A0MRY4 1105 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 MAN1A2O60476 641 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 TULP3O75386 442 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 FGFR1OPO95684 399 aaKnown RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ZBED1O96006 694 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ZNF806P0C7X5 589 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 VDRP11473 427 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 TYRP14679 529 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 SOX11P35716 441 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 CHKAP35790 457 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 MPLP40238 635 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 FMO5P49326 533 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 TKTL1P51854 596 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ATXN1P54253 815 aaKnown RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 PMS1P54277 932 aaKnown RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 BST2Q10589 180 aaKnown RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ARID5BQ14865 1188 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 E2F5Q15329 346 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 GOLGA7BQ2TAP0 167 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 PIGZQ86VD9 579 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 RASSF3Q86WH2 238 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 TMEM25Q86YD3 366 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ETFBKMTQ8IXQ9 262 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ZNF276Q8N554 614 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 TERB1Q8NA31 727 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 IL17RCQ8NAC3 791 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 RNF139Q8WU17 664 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 DDX1Q92499 740 aaKnown RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 SLC35C1Q96A29 364 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 CNOT6LQ96LI5 555 aaKnown RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 NT5C1BQ96P26 610 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 DUSP15Q9H1R2 295 aaPredicted RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 VPS45Q9NRW7 570 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 OLA1Q9NTK5 396 aaKnown RBP8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 OSER1Q9NX31 292 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 NUDT5Q9UKK9 219 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 MAN1B1Q9UKM7 699 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 TSPAN16Q9UKR8 245 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 KIAA1257Q9ULG3 409 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
HNRNPC-226ENST00000556628 SPAG17Q6Q759 2223 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 TCRBV21S2A2A0A5A6 115 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 SLC12A8A0AV02 714 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 DCDC2BA2VCK2 349 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 SGK1O00141 431 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 BIN1O00499 593 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 SLC30A4O14863 429 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 XPO1O14980 1071 aaKnown RBP8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 DCLK1O15075 740 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 MDM4O15151 490 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 P4HA2O15460 535 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 CACNG3O60359 315 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 STC2O76061 302 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 CAVIN2O95810 425 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 GNA14O95837 355 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 CYBBP04839 570 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 HMBSP08397 361 aa8.06□□□□□ -1.12
HNRNPC-226ENST00000556628 SETSIPP0DME0 302 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms