RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 MED7O43513 233 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 FBXO21O94952 628 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 APBB3O95704 486 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 MBD3O95983 291 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 IGLV3-27P01718 113 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 TGM1P22735 817 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 TYRO3Q06418 890 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 RAPGEF1Q13905 1077 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 DRAP1Q14919 205 aaPredicted RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 CRY1Q16526 586 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 STX1AQ16623 288 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 MEA1Q16626 185 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 GEN1Q17RS7 908 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 C10orf76Q5T2E6 689 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 SYPL2Q5VXT5 272 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 NADSYN1Q6IA69 706 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 SASS6Q6UVJ0 657 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 APTXQ7Z2E3 356 aaKnown RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 TAC4Q86UU9 113 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 KBTBD6Q86V97 674 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 KIAA2013Q8IYS2 634 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 C1orf131Q8NDD1 294 aaKnown RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 MDGA1Q8NFP4 955 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 DQX1Q8TE96 717 aaKnown RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 STK32AQ8WU08 396 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 RUBCNQ92622 972 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 ACDQ96AP0 544 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 FAM149B1Q96BN6 582 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 PLD4Q96BZ4 506 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 FCRL2Q96LA5 508 aaPredicted RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 FAM81BQ96LP2 452 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 XPO6Q96QU8 1125 aaKnown RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 TPSD1Q9BZJ3 242 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 DCLK3Q9C098 648 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 PARD6AQ9NPB6 346 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 OLA1Q9NTK5 396 aaKnown RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 ANO10Q9NW15 660 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 EBF1Q9UH73 591 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 XPO7Q9UIA9 1087 aaKnown RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 PCDHGC3Q9UN70 934 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 ZNF510Q9Y2H8 683 aa8.46□□□□□ -1.06
VTI1B-206ENST00000556461 HBS1LQ9Y450 684 aaKnown RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 WASH3PC4AMC7 463 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 GRAP2O75791 330 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 RPP40O75818 363 aaKnown RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 ERBB2P04626 1255 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 NCAM1P13591 858 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 ATP1A3P13637 1013 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 UCHL3P15374 230 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 ZNF18P17022 549 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 HOXD9P28356 352 aaPredicted RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 SLC6A4P31645 630 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 ACADSBP45954 432 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 DGKGP49619 791 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 COPB1P53618 953 aaKnown RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 TBX4P57082 545 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 MYL5Q02045 173 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 PTK2Q05397 1052 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 PTPN20Q4JDL3 420 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 FAM133BQ5BKY9 247 aaKnown RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 TAF3Q5VWG9 929 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 TMEM215Q68D42 235 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 ANO7Q6IWH7 933 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 KIAA1211LQ6NV74 962 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 CAVIN1Q6NZI2 390 aaKnown RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 RFWD3Q6PCD5 774 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 FAM183BPQ6ZVS7 135 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 NOP9Q86U38 636 aaKnown RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 RASSF3Q86WH2 238 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 CPXM2Q8N436 756 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 CAMKK1Q8N5S9 505 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 FAM160A2Q8N612 972 aaPredicted RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 AOPEPQ8N6M6 819 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 FRMD1Q8N878 549 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 ZNF513Q8N8E2 541 aaPredicted RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 TSTD1Q8NFU3 115 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 WFDC5Q8TCV5 224 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 DDI1Q8WTU0 396 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 GAB3Q8WWW8 586 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 DDX1Q92499 740 aaKnown RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 SLC39A13Q96H72 371 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 PPP1R13BQ96KQ4 1090 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 LHX5Q9H2C1 402 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 CD248Q9HCU0 757 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 NCDNQ9UBB6 729 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 LIMA1Q9UHB6 759 aaKnown RBP8.45□□□□□ -1.06
VTI1B-206ENST00000556461 STOML2Q9UJZ1 356 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 SIK3Q9Y2K2 1263 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 RAD54BQ9Y620 910 aa8.45□□□□□ -1.06
VTI1B-206ENST00000556461 CACNA1AO00555 2505 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CCDC163A0A0D9SF12 145 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 A0A1W2PQF6 199 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 F8VZ95 297 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 ACSL4O60488 711 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 IGLV3-25P01717 112 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CYP11B1P15538 503 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 BCKDHBP21953 392 aa8.44□□□□□ -1.06
VTI1B-206ENST00000556461 CNR2P34972 360 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms