RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PTP4A2Q12974 167 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 DHCR24Q15392 516 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 SYPL2Q5VXT5 272 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 NAIF1Q69YI7 327 aaPredicted RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 FAM183BPQ6ZVS7 135 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 RSRC2Q7L4I2 434 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 CACNA2D4Q7Z3S7 1137 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 FMNL3Q8IVF7 1028 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 CCDC105Q8IYK2 499 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 RNF214Q8ND24 703 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 TTC16Q8NEE8 873 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 CPA5Q8WXQ8 436 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 FAM3CQ92520 227 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 OTUB2Q96DC9 234 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 NOX5Q96PH1 765 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 SLC2A13Q96QE2 648 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 XPO4Q9C0E2 1151 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 MFSD1Q9H3U5 465 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 FBRSL1Q9HCM7 1045 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 OLA1Q9NTK5 396 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 SFMBT1Q9UHJ3 866 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 RASAL2Q9UJF2 1139 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 NAALADL1Q9UQQ1 740 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 SH3BP1Q9Y3L3 701 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 SIT1Q9Y3P8 196 aa10.08□□□□□ -0.8
SRP54-210ENST00000556380 HBS1LQ9Y450 684 aaKnown RBP10.08□□□□□ -0.8
SRP54-210ENST00000556380 A0A1W2PQJ5 194 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 SLC12A8A0AV02 714 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 LRRC53A6NM62 1247 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 GFRA2O00451 464 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 TRDMT1O14717 391 aaKnown RBP10.07□□□□□ -0.8
SRP54-210ENST00000556380 AP5Z1O43299 807 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 NFATC1O95644 943 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 CHRNB1P11230 501 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 FERP16591 822 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 MMP8P22894 467 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 OPRD1P41143 372 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 PRKCIP41743 596 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 RPIAP49247 311 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 GALK1P51570 392 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 ARID5AQ03989 594 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 CLEC16AQ2KHT3 1053 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 TMEM196Q5HYL7 178 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 EFHC1Q5JVL4 640 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 LY6G5CQ5SRR4 150 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 NAA35Q5VZE5 725 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 ZNF787Q6DD87 383 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 TRIM72Q6ZMU5 477 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 SLC26A9Q7LBE3 791 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 ERICH1Q86X53 443 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 GAS2L3Q86XJ1 694 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 XYLT1Q86Y38 959 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 TMEM25Q86YD3 366 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 ZDHHC17Q8IUH5 632 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 SUGP1Q8IWZ8 645 aaKnown RBP10.07□□□□□ -0.8
SRP54-210ENST00000556380 FAM217AQ8IXS0 508 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 CPA6Q8N4T0 437 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 DQX1Q8TE96 717 aaKnown RBP10.07□□□□□ -0.8
SRP54-210ENST00000556380 RNF139Q8WU17 664 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 C18orf8Q96DM3 657 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 SLC39A13Q96H72 371 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 AGPAT1Q99943 283 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 NUP58Q9BVL2 599 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 DCLK3Q9C098 648 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 PDCL3Q9H2J4 239 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 POPDC2Q9HBU9 364 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 STOML2Q9UJZ1 356 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 AGO1Q9UL18 857 aaKnown RBP10.07□□□□□ -0.8
SRP54-210ENST00000556380 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 CAPN11Q9UMQ6 739 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 CEP83Q9Y592 693 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 CACNA1IQ9P0X4 2223 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 ITIH6Q6UXX5 1313 aa10.07□□□□□ -0.8
SRP54-210ENST00000556380 PIEZO1Q92508 2521 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 HELZP42694 1942 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 TICRRQ7Z2Z1 1910 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 A0A0A0MRY4 1105 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 HOXC11O43248 304 aaPredicted RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 MSI1O43347 362 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 HSF2BPO75031 334 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 GYPCP04921 128 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 DCNP07585 359 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 HMBSP08397 361 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 NCAM1P13591 858 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 CORO1AP31146 461 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 SCNN1AP37088 669 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 RPS9P46781 194 aaKnown RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 SNX16P57768 344 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 PITX1P78337 314 aaPredicted RBP10.06□□□□□ -0.8
SRP54-210ENST00000556380 CENPCQ03188 943 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 RING1Q06587 406 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 GOLGA8FQ08AF8 430 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 GOLGA8DPQ0D2H9 430 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 FOXC1Q12948 553 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 NR1H3Q13133 447 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 NNTQ13423 1086 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 CCINQ13939 588 aa10.06□□□□□ -0.8
SRP54-210ENST00000556380 GAS6Q14393 721 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 588.8 ms