RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 CLCNKBP51801 687 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 ARPP19P56211 112 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 YBX1P67809 324 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SRSF3P84103 164 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 CREB5Q02930 508 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 GRSF1Q12849 480 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 CAPSQ13938 189 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 KRT32Q14532 448 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 PON2Q15165 354 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TEAD2Q15562 447 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 ELF2Q15723 593 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 UPP1Q16831 310 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 FAM187BQ17R55 369 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 DPY19L1Q2PZI1 675 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 ARHGAP29Q52LW3 1261 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 PPP4R3AQ6IN85 833 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TCEAL6Q6IPX3 200 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 GALNT17Q6IS24 598 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 CD300LGQ6UXG3 332 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 C11orf74Q86VG3 221 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TPH2Q8IWU9 490 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 THAP3Q8WTV1 239 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 BTN2A2Q8WVV5 523 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TCEAL3Q969E4 200 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SIGLEC10Q96LC7 697 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TCEANC2Q96MN5 208 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 FCRL3Q96P31 734 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 IPO9Q96P70 1041 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TMEM209Q96SK2 561 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 LXNQ9BS40 222 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SLC12A9Q9BXP2 914 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SLC26A6Q9BXS9 759 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 RNF26Q9BY78 433 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 FZD8Q9H461 694 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SLC32A1Q9H598 525 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 SLITRK6Q9H5Y7 841 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 KCNMB3Q9NPA1 279 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TMEM9BQ9NQ34 198 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 ASAH2Q9NR71 780 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 ANKEF1Q9NU02 776 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 PRMT7Q9NVM4 692 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 OBP2AQ9NY56 170 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 RGL1Q9NZL6 768 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 CEP72Q9P209 647 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 AFF4Q9UHB7 1163 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 GPR55Q9Y2T6 319 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 INSL5Q9Y5Q6 135 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 FASNP49327 2511 aaKnown RBP5.28□□□□□ -1.56
ATXN3-239ENST00000556315 COL4A3Q01955 1670 aa5.28□□□□□ -1.56
ATXN3-239ENST00000556315 DOCK8Q8NF50 2099 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 H0Y626 953 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 I3L4J1 428 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 ACKR2O00590 384 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 TBX3O15119 743 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 RECQL4O94761 1208 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 TRIM16O95361 564 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 LYPLA2O95372 231 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 BAG4O95429 457 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 CPP00450 1065 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 GSTM1P09488 218 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 PNLIPP16233 465 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 IFNAR1P17181 557 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 GJA1P17302 382 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 PI3P19957 117 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 BRCC3P46736 316 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 SEPHS1P49903 392 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 TWF1Q12792 350 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 PLD1Q13393 1074 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 PRPF4BQ13523 1007 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 KARSQ15046 597 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 NTRK3Q16288 839 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 ITPRIPL2Q3MIP1 535 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 CTXN3Q4LDR2 81 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 C2orf27AQ580R0 203 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 TMEM196Q5HYL7 178 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 EEF1DP3Q658K8 133 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 CEP128Q6ZU80 1094 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 ARID3BQ8IVW6 561 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 ZBTB8OSQ8IWT0 167 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 FAM177A1Q8N128 213 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 NAT16Q8N8M0 369 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 TTC8Q8TAM2 541 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 EVPLQ92817 2033 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 DACT3Q96B18 629 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 RSPRY1Q96DX4 576 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 DYDC2Q96IM9 177 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 FCRL2Q96LA5 508 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 LRRC3BQ96PB8 259 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 PPP1R10Q96QC0 940 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 NAP1L4Q99733 375 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 HSD17B14Q9BPX1 270 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 ADPGKQ9BRR6 497 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms