RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 LRRC10BA6NIK2 292 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 NEDD8-MDP1E9PL57 170 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 K7EQS6 105 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 K7ESF4 209 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 PAPSS1O43252 624 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 MSI1O43347 362 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 TULP3O75386 442 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 KAT7O95251 611 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 LATS1O95835 1130 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 APODP05090 189 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 TYRP14679 529 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 HOXA6P31267 233 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 KRT9P35527 623 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 CHKAP35790 457 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 GRIA2P42262 883 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 SLC6A11P48066 632 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 KLK7P49862 253 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 KDSRQ06136 332 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 TPGS1Q6ZTW0 290 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 BEND5Q7L4P6 421 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 APTXQ7Z2E3 356 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 ALYREFQ86V81 257 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 SCUBE3Q8IX30 993 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 FAM217AQ8IXS0 508 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 CPXM2Q8N436 756 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 C1orf131Q8NDD1 294 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 RPLP0P6Q8NHW5 317 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 FAM149B1Q96BN6 582 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 NOX5Q96PH1 765 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 CPXM1Q96SM3 734 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 BBS2Q9BXC9 721 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 STK33Q9BYT3 514 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 FAM207AQ9NSI2 230 aaPredicted RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 C2orf42Q9NWW7 574 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 DEC1Q9P2X7 70 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 SFMBT1Q9UHJ3 866 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 MYO18AQ92614 2054 aaKnown RBP12.04□□□□□ -0.48
SLIRP-205ENST00000556310 FRYLO94915 3013 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 EML5Q05BV3 1969 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 A0A0A0MRY4 1105 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 SMAPO00193 183 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 GFRA3O60609 400 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 LILRB5O75023 590 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 PENKP01210 267 aaPredicted RBP12.03□□□□□ -0.48
SLIRP-205ENST00000556310 IGLV3-27P01718 113 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 FYNP06241 537 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 NCAM1P13591 858 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 ATP1A3P13637 1013 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 CYP11B1P15538 503 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 ZNF165P49910 485 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 RING1Q06587 406 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 MESP2Q0VG99 397 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 NNTQ13423 1086 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 SYCP1Q15431 976 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 GRAMD4Q6IC98 578 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 SYT13Q7L8C5 426 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 DENND1CQ8IV53 801 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 DHX40Q8IX18 779 aaKnown RBP12.03□□□□□ -0.48
SLIRP-205ENST00000556310 PARP9Q8IXQ6 854 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 WDTC1Q8N5D0 677 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 NAT16Q8N8M0 369 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 TERB1Q8NA31 727 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 EPS8L1Q8TE68 723 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 DQX1Q8TE96 717 aaKnown RBP12.03□□□□□ -0.48
SLIRP-205ENST00000556310 USP33Q8TEY7 942 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 PPP1R13BQ96KQ4 1090 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 SERPINB11Q96P15 392 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 XPO6Q96QU8 1125 aaKnown RBP12.03□□□□□ -0.48
SLIRP-205ENST00000556310 ERGIC2Q96RQ1 377 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 DNAJC17Q9NVM6 304 aaKnown RBP12.03□□□□□ -0.48
SLIRP-205ENST00000556310 TJP2Q9UDY2 1190 aa12.03□□□□□ -0.48
SLIRP-205ENST00000556310 SPAG17Q6Q759 2223 aa12.02□□□□□ -0.48
SLIRP-205ENST00000556310 SYCE3A1L190 88 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 SMTNL1A8MU46 457 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 EPHB6O15197 1021 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 GLI1P08151 1106 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 CDH5P33151 784 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 SEC13P55735 322 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 JAM2P57087 298 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 SNX16P57768 344 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 ZNF445P59923 1031 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 POLR2FP61218 127 aaKnown RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 MRPS21P82921 87 aaKnown RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 UBXN1Q04323 297 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 HSF5Q4G112 596 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 PTPN20Q4JDL3 420 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 FYB2Q5VWT5 728 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 NUGGCQ68CJ6 796 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 ASCL5Q7RTU5 278 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 SFTPA1Q8IWL2 248 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 TMEM35BQ8NCS4 154 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms