RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PIP4P1Q86T03 277 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 FMR1NBQ8N0W7 255 aaPredicted RBP13.93□□□□□ -0.18
TGFB3-204ENST00000556285 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 KDF1Q8NAX2 398 aaPredicted RBP13.93□□□□□ -0.18
TGFB3-204ENST00000556285 SORCS1Q8WY21 1168 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 PIWIL1Q96J94 861 aaKnown RBP13.93□□□□□ -0.18
TGFB3-204ENST00000556285 HSPA12BQ96MM6 686 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 GTPBP2Q9BX10 602 aaKnown RBP13.93□□□□□ -0.18
TGFB3-204ENST00000556285 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 CAPN10Q9HC96 672 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 MARCH2Q9P0N8 246 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 SLC6A14Q9UN76 642 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 SLC27A6Q9Y2P4 619 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 FREM2Q5SZK8 3169 aa13.93□□□□□ -0.18
TGFB3-204ENST00000556285 NBEAQ8NFP9 2946 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 ADAMTS20P59510 1910 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 CETN3O15182 167 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 SERPINF2P08697 491 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 EPB41P11171 864 aaKnown RBP13.92□□□□□ -0.18
TGFB3-204ENST00000556285 MAOBP27338 520 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 IL12RB1P42701 662 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 COG7P83436 770 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 PDE4CQ08493 712 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 LRMPQ12912 555 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 SEMA3BQ13214 749 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 DUOXA1Q1HG43 343 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 FUT11Q495W5 492 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
TGFB3-204ENST00000556285 TCERG1LQ5VWI1 586 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 TMEM215Q68D42 235 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 TADA2BQ86TJ2 420 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 ANKRD52Q8NB46 1076 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 UBA3Q8TBC4 463 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 CAMK1GQ96NX5 476 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
TGFB3-204ENST00000556285 MKRN2Q9H000 416 aaKnown RBP13.92□□□□□ -0.18
TGFB3-204ENST00000556285 KCNJ18B7U540 433 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 GFRA2O00451 464 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 TSPAN3O60637 253 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 ZNF217O75362 1048 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 GABBR2O75899 941 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 ZBED1O96006 694 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 CALCAP01258 141 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 GFPT1Q06210 699 aaPredicted RBP13.91□□□□□ -0.18
TGFB3-204ENST00000556285 CUL2Q13617 745 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 PM20D1Q6GTS8 502 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 RSRC2Q7L4I2 434 aaKnown RBP13.91□□□□□ -0.18
TGFB3-204ENST00000556285 ZC3H3Q8IXZ2 948 aaKnown RBP13.91□□□□□ -0.18
TGFB3-204ENST00000556285 RBBP8NLQ8NC74 664 aaPredicted RBP13.91□□□□□ -0.18
TGFB3-204ENST00000556285 EDEM1Q92611 657 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 ZNF419Q96HQ0 510 aaPredicted RBP13.91□□□□□ -0.18
TGFB3-204ENST00000556285 FAXDC2Q96IV6 333 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 CDK5RAP1Q96SZ6 601 aaKnown RBP13.91□□□□□ -0.18
TGFB3-204ENST00000556285 THAP10Q9P2Z0 257 aaPredicted RBP13.91□□□□□ -0.18
TGFB3-204ENST00000556285 TSPAN16Q9UKR8 245 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 ZNF510Q9Y2H8 683 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 COQ4Q9Y3A0 265 aa13.91□□□□□ -0.18
TGFB3-204ENST00000556285 FAM208BQ5VWN6 2430 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 SRRM3A6NNA2 597 aaPredicted RBP13.9□□□□□ -0.18
TGFB3-204ENST00000556285 YJEFN3A6XGL0 299 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 E7ENQ6 273 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 TAF4O00268 1085 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ZBTB24O43167 697 aaPredicted RBP13.9□□□□□ -0.18
TGFB3-204ENST00000556285 STX10O60499 249 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 CD59P13987 128 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 PRKCHP24723 683 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 HOXD12P35452 270 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 CHKAP35790 457 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ADIGQ0VDE8 80 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ENPP2Q13822 863 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ZNF234Q14588 700 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 TRIP4Q15650 581 aaPredicted RBP13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ZNF658Q5TYW1 1059 aaPredicted RBP13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ISM2Q6H9L7 571 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 CACUL1Q86Y37 369 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 FMNL3Q8IVF7 1028 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 FAM217AQ8IXS0 508 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ARHGAP18Q8N392 663 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 CPXM2Q8N436 756 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 MINDY1Q8N5J2 469 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 UBR7Q8N806 425 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ENGASEQ8NFI3 743 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 CEP76Q8TAP6 659 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 DDI1Q8WTU0 396 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 TFAP2BQ92481 460 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ZSWIM1Q9BR11 485 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 DCLK3Q9C098 648 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 DNAI2Q9GZS0 605 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 SFMBT1Q9UHJ3 866 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 STRIP2Q9ULQ0 834 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 ATP6V1DQ9Y5K8 247 aa13.9□□□□□ -0.18
TGFB3-204ENST00000556285 PLXNA2O75051 1894 aa13.89□□□□□ -0.19
TGFB3-204ENST00000556285 NYNRINQ9P2P1 1898 aaKnown RBP13.89□□□□□ -0.19
TGFB3-204ENST00000556285 ZFYVE26Q68DK2 2539 aa13.89□□□□□ -0.19
TGFB3-204ENST00000556285 PIK3R2O00459 728 aa13.89□□□□□ -0.19
TGFB3-204ENST00000556285 ARHGAP33O14559 1287 aa13.89□□□□□ -0.19
TGFB3-204ENST00000556285 XPO1O14980 1071 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms