RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 HPDLQ96IR7 371 aa16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 VPS16Q9H269 839 aa16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 NDST4Q9H3R1 872 aa16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 FAM124BQ9H5Z6 455 aaPredicted RBP16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 PRDM16Q9HAZ2 1276 aa16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 CD248Q9HCU0 757 aa16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 SCUBE2Q9NQ36 999 aa16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 CHORDC1Q9UHD1 332 aaPredicted RBP16.76■□□□□ 0.27
SDR39U1-217ENST00000556249 E2F8A0AVK6 867 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 FAM149AA5PLN7 773 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 TRABD2BA6NFA1 517 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 WASH3PC4AMC7 463 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 CLDN5O00501 218 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 TRIM66O15016 1216 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 ZBTB24O43167 697 aaPredicted RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 COCHO43405 550 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 AFPP02771 609 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 TMEM191BP0C7N4 346 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 IRF1P10914 325 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 GNSP15586 552 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 PPP3CCP48454 512 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 MIIPQ5JXC2 388 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 FKBP15Q5T1M5 1219 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 SYCP2LQ5T4T6 812 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 KIAA1324Q6UXG2 1013 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 TMPRSS7Q7RTY8 843 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 ZCCHC9Q8N567 271 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 KIAA1958Q8N8K9 716 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 MYCBPAPQ8TBZ2 947 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 C8orf48Q96LL4 319 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 SLITRK1Q96PX8 696 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 MMS19Q96T76 1030 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 MRPL45Q9BRJ2 306 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 XPO4Q9C0E2 1151 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 MIR1-1HGQ9H1L0 117 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 SPHK2Q9NRA0 654 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 TOR4AQ9NXH8 423 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 SH3BP1Q9Y3L3 701 aa16.75■□□□□ 0.27
SDR39U1-217ENST00000556249 PRRT4C9JH25 899 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 HOXC11O43248 304 aaPredicted RBP16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 GTF2H1P32780 548 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 ZNF75DP51815 510 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 MYO1EQ12965 1108 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 NR1I3Q14994 352 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 MAPRE1Q15691 268 aaKnown RBP16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 SDE2Q6IQ49 451 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 LIMS2Q7Z4I7 341 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 GLRX5Q86SX6 157 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 DDX42Q86XP3 938 aaKnown RBP eCLIP16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 MRFAP1L1Q96HT8 127 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 MRGPRX1Q96LB2 322 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 NAP1L5Q96NT1 182 aaPredicted RBP16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 DPEP3Q9H4B8 488 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 GAREM1Q9H706 876 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 CCSER2Q9H7U1 834 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 DNAJC17Q9NVM6 304 aaKnown RBP16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 CACNA2D2Q9NY47 1150 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 EHD2Q9NZN4 543 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 SUSD2Q9UGT4 822 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 STARD13Q9Y3M8 1113 aa16.74■□□□□ 0.27
SDR39U1-217ENST00000556249 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 MEI4A8MW99 385 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 ADCY5O95622 1261 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 WARSP23381 471 aaKnown RBP16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 YWHAQP27348 245 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 AP3M2P53677 418 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 CLDN10P78369 228 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 CCDC157Q569K6 752 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 WDR45BQ5MNZ6 344 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 GRAMD4Q6IC98 578 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 DPH6Q7L8W6 267 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 PLEKHO2Q8TD55 490 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 CCDC127Q96BQ5 260 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 TOE1Q96GM8 510 aaKnown RBP16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 CEP295NLQ96MC4 621 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 DCBLD2Q96PD2 775 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 CGRRF1Q99675 332 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 TM7SF3Q9NS93 570 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 KIAA1522Q9P206 1035 aaPredicted RBP16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 FNDC3AQ9Y2H6 1198 aaKnown RBP16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 R3HCC1Q9Y3T6 440 aaKnown RBP16.73■□□□□ 0.27
SDR39U1-217ENST00000556249 FLNBO75369 2602 aaKnown RBP16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 NEDD8-MDP1E9PL57 170 aa16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 PMM2O15305 246 aa16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 P4HA2O15460 535 aa16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 DLATP10515 647 aaKnown RBP16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 TNNI1P19237 187 aa16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 GNL1P36915 607 aaPredicted RBP16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 DLG4P78352 724 aa16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 BNC1Q01954 994 aa16.72■□□□□ 0.27
SDR39U1-217ENST00000556249 UBXN1Q04323 297 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms