RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SNRNP25Q9BV90 132 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 SLC13A1Q9BZW2 595 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 MROH8Q9H579 483 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 NRDE2Q9H7Z3 1164 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 KCNK13Q9HB14 408 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 FBXO6Q9NRD1 293 aaPredicted RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 GPATCH2LQ9NWQ4 482 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CNTN3Q9P232 1028 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PLXNA1Q9UIW2 1896 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 COL1A2P08123 1366 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CCDC195A0A1B0GUA6 201 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 FAM237BA0A1B0GVD1 139 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 SLC15A5A6NIM6 579 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 A8MXQ7 604 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CXCL11O14625 94 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 IRF6O14896 467 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 NVLO15381 856 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 CSDE1O75534 798 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 CIB2O75838 187 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PFKMP08237 780 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ACADSP16219 412 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CYP3A5P20815 502 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 IL4RP24394 825 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CRHR1P34998 444 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PGM1P36871 562 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 VHLP40337 213 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PTPN9P43378 593 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 SESN3P58005 492 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CDK18Q07002 472 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 BST1Q10588 318 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 RCN1Q15293 331 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CHI3L2Q15782 390 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 DBN1Q16643 649 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 AMHR2Q16671 573 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 DCAF4L1Q3SXM0 396 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 HEATR6Q6AI08 1181 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 CAPRIN2Q6IMN6 1127 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 TRNP1Q6NT89 227 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PMF1Q6P1K2 205 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 UNC5AQ6ZN44 842 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ARCQ7LC44 396 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ACOT1Q86TX2 421 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ERO1BQ86YB8 467 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 SCUBE3Q8IX30 993 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 KIRREL3Q8IZU9 778 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 NDUFAF2Q8N183 169 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 C12orf29Q8N999 325 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PPFIBP2Q8ND30 876 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 CDKL2Q92772 493 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 COPS5Q92905 334 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 ZBTB10Q96DT7 871 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PIWIL1Q96J94 861 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 QKIQ96PU8 341 aaKnown RBP eCLIP7.24□□□□□ -1.257e-10■■■■■ 43.3
TDP1-213ENST00000555880 SIKE1Q9BRV8 207 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 OSBPL1AQ9BXW6 950 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 RNPEPQ9H4A4 650 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 DHX35Q9H5Z1 703 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 ELP3Q9H9T3 547 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 FAM49BQ9NUQ9 324 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PCMTD2Q9NV79 361 aa7.24□□□□□ -1.25
TDP1-213ENST00000555880 PPARGC1AQ9UBK2 798 aaKnown RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 CORO1CQ9ULV4 474 aaPredicted RBP7.24□□□□□ -1.25
TDP1-213ENST00000555880 RALGAPA2Q2PPJ7 1873 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 DNAJC25-GNG10A0A024R161 153 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.23□□□□□ -1.25
TDP1-213ENST00000555880 FAM159BA6NKW6 160 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 CXorf49A8MYA2 514 aaPredicted RBP7.23□□□□□ -1.25
TDP1-213ENST00000555880 ADM5C9JUS6 153 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 TSPAN1O60635 241 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 RFPL1O75677 317 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 CNMDO75829 334 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 VTNP04004 478 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 LGALS2P05162 132 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 CYP2C8P10632 490 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 RARBP10826 455 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 SKIP12755 728 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 FDFT1P37268 417 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 ARL4AP40617 200 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 MAGEA3P43357 314 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 MRPS35P82673 323 aaKnown RBP7.23□□□□□ -1.25
TDP1-213ENST00000555880 BMPR2Q13873 1038 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 GPR162Q16538 588 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 DPYSL2Q16555 572 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 DNAL1Q4LDG9 190 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 RAB6CQ53S08 254 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 PPP1R26Q5T8A7 1209 aaPredicted RBP7.23□□□□□ -1.25
TDP1-213ENST00000555880 MROH9Q5TGP6 573 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 CASC4Q6P4E1 433 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 RFWD3Q6PCD5 774 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 KYAT3Q6YP21 454 aaKnown RBP7.23□□□□□ -1.25
TDP1-213ENST00000555880 RINLQ6ZS11 566 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 TMEM110Q86TL2 294 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 ARID3BQ8IVW6 561 aaPredicted RBP7.23□□□□□ -1.25
TDP1-213ENST00000555880 HACE1Q8IYU2 909 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 ANKRD13AQ8IZ07 590 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 ZC3H15Q8WU90 426 aaKnown RBP7.23□□□□□ -1.25
TDP1-213ENST00000555880 SPDL1Q96EA4 605 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 FGD4Q96M96 766 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 RILPQ96NA2 401 aa7.23□□□□□ -1.25
TDP1-213ENST00000555880 FAM167BQ9BTA0 163 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms