RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CA12O43570 354 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 AP1G2O75843 785 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 MYCNP04198 464 aaPredicted RBP25.13■■□□□ 1.61
TMEM260-207ENST00000555497 ATP2A2P16615 1042 aaKnown RBP25.13■■□□□ 1.61
TMEM260-207ENST00000555497 IBSPP21815 317 aaPredicted RBP25.13■■□□□ 1.61
TMEM260-207ENST00000555497 ARL4AP40617 200 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 TIGD5Q53EQ6 642 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 MRPL10Q7Z7H8 261 aaKnown RBP25.13■■□□□ 1.61
TMEM260-207ENST00000555497 MYO18AQ92614 2054 aaKnown RBP25.13■■□□□ 1.61
TMEM260-207ENST00000555497 KLF6Q99612 283 aaPredicted RBP25.13■■□□□ 1.61
TMEM260-207ENST00000555497 ABCF3Q9NUQ8 709 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 GIT1Q9Y2X7 761 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 TTLL3Q9Y4R7 772 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 MFSD11O43934 449 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 CAPN15O75808 1086 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 THPOP40225 353 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 SCTRP47872 440 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 LHX1P48742 406 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 CACNB2Q08289 660 aaPredicted RBP25.13■■□□□ 1.61
TMEM260-207ENST00000555497 FBXW10Q5XX13 1052 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 TMEM86AQ8N2M4 240 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 LGMNQ99538 433 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 RHOBTB2Q9BYZ6 727 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 ANLNQ9NQW6 1124 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 PADI3Q9ULW8 664 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 GOLGA8RI6L899 631 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 SEPT4O43236 478 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 AMHP03971 560 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 ASGR1P07306 291 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 FCGRTP55899 365 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 SREBF2Q12772 1141 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 SPARCL1Q14515 664 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 UPP1Q16831 310 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 HACE1Q8IYU2 909 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 ADAM32Q8TC27 787 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 RNF139Q8WU17 664 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 SLC44A1Q8WWI5 657 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 RTP3Q9BQQ7 232 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 TRIM56Q9BRZ2 755 aaKnown RBP25.12■■□□□ 1.61
TMEM260-207ENST00000555497 C12orf65Q9H3J6 166 aaKnown RBP25.12■■□□□ 1.61
TMEM260-207ENST00000555497 GGT7Q9UJ14 662 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 GPR182O15218 404 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 GHRP10912 638 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 GRIA1P42261 906 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 DAOAP59103 153 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 KCNA10Q16322 511 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 FAM47EQ6ZV65 393 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 TRPM8Q7Z2W7 1104 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 SPATA21Q7Z572 469 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 RPAINQ86UA6 219 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 VPS52Q8N1B4 723 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 MCUQ8NE86 351 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 ACTR5Q9H9F9 607 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-207ENST00000555497 SPC25Q9HBM1 224 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 RCOR3Q9P2K3 495 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-207ENST00000555497 PRKAG3Q9UGI9 489 aa25.12■■□□□ 1.61
TMEM260-207ENST00000555497 I6L893 689 aaPredicted RBP25.11■■□□□ 1.61
TMEM260-207ENST00000555497 MAGEA3P43357 314 aa25.11■■□□□ 1.61
TMEM260-207ENST00000555497 TM4SF4P48230 202 aa25.11■■□□□ 1.61
TMEM260-207ENST00000555497 NKX3-2P78367 333 aa25.11■■□□□ 1.61
TMEM260-207ENST00000555497 PRKCZQ05513 592 aa25.11■■□□□ 1.61
TMEM260-207ENST00000555497 DEUP1Q05D60 604 aa25.11■■□□□ 1.61
TMEM260-207ENST00000555497 PAN2Q504Q3 1202 aaKnown RBP25.11■■□□□ 1.61
TMEM260-207ENST00000555497 PSTKQ8IV42 348 aaKnown RBP25.11■■□□□ 1.61
TMEM260-207ENST00000555497 FRMD8Q9BZ67 464 aaPredicted RBP25.11■■□□□ 1.61
TMEM260-207ENST00000555497 SSU72Q9NP77 194 aaKnown RBP25.11■■□□□ 1.61
TMEM260-207ENST00000555497 PNPLA8Q9NP80 782 aa25.11■■□□□ 1.61
TMEM260-207ENST00000555497 HHLA1C9JL84 531 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 F5H423 210 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-207ENST00000555497 POMCP01189 267 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 USP17L7P0C7H9 530 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 CCND3P30281 292 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-207ENST00000555497 FAAP100Q0VG06 881 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 DNAJC3Q13217 504 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 MTFR1Q15390 333 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 TTC31Q49AM3 519 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-207ENST00000555497 HEATR6Q6AI08 1181 aaKnown RBP25.1■■□□□ 1.61
TMEM260-207ENST00000555497 TP53INP2Q8IXH6 220 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 MPP5Q8N3R9 675 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 TFB1MQ8WVM0 346 aaKnown RBP25.1■■□□□ 1.61
TMEM260-207ENST00000555497 HTR3CQ8WXA8 447 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 XPNPEP3Q9NQH7 507 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 ZC3H7BQ9UGR2 993 aaKnown RBP25.1■■□□□ 1.61
TMEM260-207ENST00000555497 STAP1Q9ULZ2 295 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 TLL2Q9Y6L7 1015 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 CXorf49A8MYA2 514 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-207ENST00000555497 FAM72CH0Y354 149 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 CREB3O43889 395 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 FAM155BO75949 473 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 PTK7Q13308 1070 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 RAB41Q5JT25 222 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 FAM72AQ5TYM5 149 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 FAM72DQ6L9T8 149 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 LVRNQ6Q4G3 990 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 FAM72BQ86X60 149 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 BANPQ8N9N5 519 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 SLC7A14Q8TBB6 771 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 CDH9Q9ULB4 789 aa25.1■■□□□ 1.61
TMEM260-207ENST00000555497 CD300LGQ6UXG3 332 aa25.09■■□□□ 1.61
TMEM260-207ENST00000555497 C4orf22Q6V702 233 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms