RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CCDC66A2RUB6 948 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 MIF4GDA9UHW6 222 aaKnown RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 PSTPIP1O43586 416 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 RNF8O76064 485 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 OAS1P00973 400 aaKnown RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 HNRNPA1P09651 372 aaKnown RBP eCLIP11.2□□□□□ -0.62
TDP1-211ENST00000555178 HOXA9P31269 272 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 KCNQ1P51787 676 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 ZC3H12AQ5D1E8 599 aaKnown RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 C10orf120Q5SQS8 335 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 ARTNQ5T4W7 220 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 PYROXD2Q8N2H3 581 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 UBL4BQ8N7F7 174 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 HDAC7Q8WUI4 952 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 MSLNLQ96KJ4 702 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 CDCA3Q99618 268 aaPredicted RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 CARD6Q9BX69 1037 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 FAM204AQ9H8W3 233 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 PRDM6Q9NQX0 595 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 ASAH2Q9NR71 780 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 DDIT4Q9NX09 232 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 TRPM5Q9NZQ8 1165 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 ASB3Q9Y575 518 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 PAPLNO95428 1278 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 KRT1P04264 644 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 RARAP10276 462 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 TCP1P17987 556 aaKnown RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 RWDD2BP57060 319 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 COL19A1Q14993 1142 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 PABPC1LQ4VXU2 614 aaKnown RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 ZFYVE27Q5T4F4 411 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 SNX30Q5VWJ9 437 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 ITIH5Q86UX2 942 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 TTC16Q8NEE8 873 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 GOLGA1Q92805 767 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 MYEOVQ96EZ4 313 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 P2RY11Q96G91 374 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 SNRNP25Q9BV90 132 aaKnown RBP11.2□□□□□ -0.62
TDP1-211ENST00000555178 SFXN1Q9H9B4 322 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 COMMD8Q9NX08 183 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 STAP1Q9ULZ2 295 aa11.2□□□□□ -0.62
TDP1-211ENST00000555178 PRPSAP2O60256 369 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 ENDOD1O94919 500 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 C1RP00736 705 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 SP100P23497 879 aaPredicted RBP11.19□□□□□ -0.62
TDP1-211ENST00000555178 PCK1P35558 622 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 ADCY2Q08462 1091 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 MFSD7Q6UXD7 560 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 RSRC2Q7L4I2 434 aaKnown RBP11.19□□□□□ -0.62
TDP1-211ENST00000555178 GPR149Q86SP6 731 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 ZDHHC14Q8IZN3 488 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 RSPRY1Q96DX4 576 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 CEP295NLQ96MC4 621 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 LRRC3BQ96PB8 259 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 ADAM7Q9H2U9 754 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 PIDD1Q9HB75 910 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.19□□□□□ -0.62
TDP1-211ENST00000555178 CLIC5Q9NZA1 410 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 NR2E1Q9Y466 385 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 LRRD1A4D1F6 860 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 C3orf70A6NLC5 250 aaPredicted RBP11.19□□□□□ -0.62
TDP1-211ENST00000555178 FAM72CH0Y354 149 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 IRAK2O43187 625 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 PRAMEF12O95522 483 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 KLKB1P03952 638 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 IRF1P10914 325 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 KRT10P13645 584 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 PRLRP16471 622 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 RDXP35241 583 aaKnown RBP11.19□□□□□ -0.62
TDP1-211ENST00000555178 ACAP1Q15027 740 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 HECTD3Q5T447 861 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 GPR158Q5T848 1215 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 FAM72AQ5TYM5 149 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 FAM72DQ6L9T8 149 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 MSANTD2Q6P1R3 559 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 PDZD4Q76G19 769 aaPredicted RBP11.19□□□□□ -0.62
TDP1-211ENST00000555178 STRADAQ7RTN6 431 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 FAM72BQ86X60 149 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 CCDC50Q8IVM0 306 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 KATNAL2Q8IYT4 538 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 ELMOD1Q8N336 334 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 FCRL2Q96LA5 508 aaPredicted RBP11.19□□□□□ -0.62
TDP1-211ENST00000555178 GAS2L1Q99501 681 aaPredicted RBP11.19□□□□□ -0.62
TDP1-211ENST00000555178 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 CARD9Q9H257 536 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
TDP1-211ENST00000555178 MARCH2Q9P0N8 246 aa11.19□□□□□ -0.62
TDP1-211ENST00000555178 SLC12A8A0AV02 714 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 XYLBO75191 536 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 FGGP02679 453 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 C2orf54Q08AI8 447 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 FAM182AQ5T1J6 154 aa11.18□□□□□ -0.62
TDP1-211ENST00000555178 RNF139Q8WU17 664 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms