RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 PCDHA10Q9Y5I2 948 aa6.05□□□□□ -1.44
PSEN1-211ENST00000554995 FSD2A1L4K1 749 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 MBD3L5A6NJ08 208 aaPredicted RBP6.04□□□□□ -1.44
PSEN1-211ENST00000554995 PEX12O00623 359 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 NKX2-8O15522 239 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 SPRY2O43597 315 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 FAM20BO75063 409 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 FESP07332 822 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 RHOP08100 348 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 PEPDP12955 493 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 BMP7P18075 431 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 DDX6P26196 483 aaKnown RBP eCLIP6.04□□□□□ -1.44
PSEN1-211ENST00000554995 CFPP27918 469 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 MCM5P33992 734 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 TOB2Q14106 344 aaPredicted RBP6.04□□□□□ -1.44
PSEN1-211ENST00000554995 CBWD5Q5RIA9 395 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 TREML2Q5T2D2 321 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 ARMC6Q6NXE6 501 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 C16orf89Q6UX73 402 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 DPY19L3Q6ZPD9 716 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 C1QL4Q86Z23 238 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.04□□□□□ -1.44
PSEN1-211ENST00000554995 PTGR2Q8N8N7 351 aaPredicted RBP6.04□□□□□ -1.44
PSEN1-211ENST00000554995 MYCBPAPQ8TBZ2 947 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 FUBP1Q96AE4 644 aaKnown RBP6.04□□□□□ -1.44
PSEN1-211ENST00000554995 CTHRC1Q96CG8 243 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 VPS50Q96JG6 964 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 PIGSQ96S52 555 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 TREX2Q9BQ50 279 aaPredicted RBP6.04□□□□□ -1.44
PSEN1-211ENST00000554995 IL21RQ9HBE5 538 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 POLG2Q9UHN1 485 aa6.04□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3DA0A087WVF3 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3IA0A087WXS9 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3EA0A087X179 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3KA0A087X1G2 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 CCDC187A0A096LP49 1063 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3BA6NDS4 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3FA6NER0 549 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 OTOL1A6NHN0 477 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3LB9A6J9 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 MUSKO15146 869 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 HNRNPRO43390 633 aaKnown RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 PRICKLE3O43900 615 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 ZBED4O75132 1171 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 PMPCBO75439 489 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TMEM63AO94886 807 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3HP0C7X1 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 GKP32189 559 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 PNPLA4P41247 253 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 CCR9P51686 369 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 ITIH3Q06033 890 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 ICAM4Q14773 271 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBCCQ15814 346 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 HS1BP3Q53T59 392 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 LIPMQ5VYY2 423 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3GQ6DHY5 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3CQ6IPX1 549 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 R3HCC1LQ7Z5L2 792 aaKnown RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 ARMC8Q8IUR7 673 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 TBC1D3Q8IZP1 549 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 SSH3Q8TE77 659 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 SNRNP27Q8WVK2 155 aaKnown RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 XAGE5Q8WWM1 108 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 FKBP10Q96AY3 582 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 ERP27Q96DN0 273 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 APOPT1Q96IL0 206 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 WWC2-AS2Q96NR7 200 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 ADOQ96SZ5 270 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 FUZQ9BT04 418 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 PHF7Q9BWX1 381 aaPredicted RBP6.03□□□□□ -1.44
PSEN1-211ENST00000554995 ASAP1Q9ULH1 1129 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 SLC12A4Q9UP95 1085 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 GDAQ9Y2T3 454 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 PCDHB2Q9Y5E7 798 aa6.03□□□□□ -1.44
PSEN1-211ENST00000554995 CA12O43570 354 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 IL6RP08887 468 aaPredicted RBP6.02□□□□□ -1.45
PSEN1-211ENST00000554995 ACP5P13686 325 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 CHN1P15882 459 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 CREB1P16220 341 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 TGM1P22735 817 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 MMP8P22894 467 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 ADRA1DP25100 572 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 ZFP36P26651 326 aaKnown RBP6.02□□□□□ -1.45
PSEN1-211ENST00000554995 GRK5P34947 590 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 GGT5P36269 586 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 POLD2P49005 469 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 RCAN1P53805 252 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 NAP1L1P55209 391 aaKnown RBP6.02□□□□□ -1.45
PSEN1-211ENST00000554995 NXPH1P58417 271 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 RPP30P78346 268 aaKnown RBP6.02□□□□□ -1.45
PSEN1-211ENST00000554995 DEUP1Q05D60 604 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 SF3B3Q15393 1217 aaKnown RBP6.02□□□□□ -1.45
PSEN1-211ENST00000554995 CYP1B1Q16678 543 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 FAM187BQ17R55 369 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 TEDDM1Q5T9Z0 273 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 NAA35Q5VZE5 725 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 FAM205BPQ63HN1 556 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 DENND1BQ6P3S1 775 aa6.02□□□□□ -1.45
PSEN1-211ENST00000554995 H1FNTQ75WM6 255 aaPredicted RBP6.02□□□□□ -1.45
PSEN1-211ENST00000554995 TMPRSS6Q8IU80 811 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms