RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 PRR23D2P0DMB1 279 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 VDRP11473 427 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 BMP3P12645 472 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PTGIRP43119 386 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 QARSP47897 775 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 GSSP48637 474 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 LAMC2Q13753 1193 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FRG1Q14331 258 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DMC1Q14565 340 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 NFIL3Q16649 462 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FAM160B1Q5W0V3 765 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ADGRD1Q6QNK2 874 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 USP17L1Q7RTZ2 530 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 RELL1Q8IUW5 271 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 LRRC49Q8IUZ0 686 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TBC1D21Q8IYX1 336 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 EID3Q8N140 333 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PIK3C3Q8NEB9 887 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 CGREF1Q99674 301 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TUBA1CQ9BQE3 449 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 MSTO1Q9BUK6 570 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 OSBPL10Q9BXB5 764 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SPAG4Q9NPE6 437 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 GRHL1Q9NZI5 618 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PHF11Q9UIL8 331 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 STAP1Q9ULZ2 295 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DOLKQ9UPQ8 538 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 CYP2D7A0A087X1C5 515 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ISPDA4D126 451 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 BBIP1A8MTZ0 92 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 MEI4A8MW99 385 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 HNRNPCL2B2RXH8 293 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FANCGO15287 622 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 HDAC3O15379 428 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DENRO43583 198 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 AKAP3O75969 853 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 USP17L8P0C7I0 530 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 CYP2C9P11712 490 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TFE3P19532 575 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 NMT1P30419 496 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PTGS2P35354 604 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 GRIK1P39086 918 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 NAMPTP43490 491 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PSME3P61289 254 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 GCNT1Q02742 428 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TRIM32Q13049 653 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SQLEQ14534 574 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PDK1Q15118 436 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SF3B3Q15393 1217 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 KYAT1Q16773 422 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 N4BP2L1Q5TBK1 243 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 AGAP9Q5VTM2 703 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 LPCAT4Q643R3 524 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 LINC00523Q86TU6 105 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ZDHHC13Q8IUH4 622 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TRUB1Q8WWH5 349 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 OTULINQ96BN8 352 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 HNRNPABQ99729 332 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 MTG1Q9BT17 334 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SMARCAD1Q9H4L7 1026 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 CHORDC1Q9UHD1 332 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ZNF232Q9UNY5 417 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TNS3Q68CZ2 1445 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 K7ERI5 159 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ITM2AO43736 263 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FAM189A1O60320 539 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 CCNT2O60583 730 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DGKIO75912 1065 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 RHOBTB1O94844 696 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 UMPSP11172 480 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DDX5P17844 614 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TGM2P21980 687 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PIK3R1P27986 724 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PSMB9P28065 219 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PEX2P28328 305 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ELK3P41970 407 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 AQP4P55087 323 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 RPL10AP62906 217 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SUZ12Q15022 739 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 MAPRE1Q15691 268 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SNRNP35Q16560 246 aaKnown RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ZNF394Q53GI3 561 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 CCNYL2Q5T2Q4 361 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DRICH1Q6PGQ1 229 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 MCOLN2Q8IZK6 566 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FAM47BQ8NA70 645 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 TMCO6Q96DC7 493 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 NLRP4Q96MN2 994 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 RUBCNLQ9H714 662 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 FBXO6Q9NRD1 293 aaPredicted RBP6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ING4Q9UNL4 249 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 WASF2Q9Y6W5 498 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 DISP2A7MBM2 1401 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 PRR5-ARHGAP8B1AHC4 643 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 LOC110117498-PIK3R3F6TDL0 507 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 ZBTB39O15060 712 aa6.58□□□□□ -1.36
PCNX1-207ENST00000554691 SLC22A1O15245 554 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms