RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 METTL3Q86U44 580 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 FAM217AQ8IXS0 508 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 ZC3H3Q8IXZ2 948 aaKnown RBP12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 TRIML1Q8N9V2 468 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 ANKRD52Q8NB46 1076 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 FBXL13Q8NEE6 735 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 OR2I1PQ8NGU4 316 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 SCNM1Q9BWG6 230 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 GDPD2Q9HCC8 539 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 RASAL2Q9UJF2 1139 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 COQ4Q9Y3A0 265 aa12.82□□□□□ -0.36
MTHFD1-207ENST00000554677 DSPP15924 2871 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 FREM2Q5SZK8 3169 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 GJB3O75712 270 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 CD59P13987 128 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 CHKAP35790 457 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 IL12RB1P42701 662 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 PRCPP42785 496 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 MXI1P50539 228 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 FUT11Q495W5 492 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 UNQ6494/PRO21346Q6UXR6 183 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 TADA2BQ86TJ2 420 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 DENND1CQ8IV53 801 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 KDF1Q8NAX2 398 aaPredicted RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 GATA6Q92908 595 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 HSPA12BQ96MM6 686 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 CDK5RAP1Q96SZ6 601 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 DCLK3Q9C098 648 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 SCAND2PQ9GZW5 306 aaPredicted RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 MKRN2Q9H000 416 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 ITM2CQ9NQX7 267 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 WSB2Q9NYS7 404 aaPredicted RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 MARCH2Q9P0N8 246 aa12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 USP36Q9P275 1121 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-207ENST00000554677 PTPRBP23467 1997 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 PKD1L2Q7Z442 2459 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 SPAARA0A1B0GVQ0 90 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 SLC12A8A0AV02 714 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 CETN3O15182 167 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 GABBR2O75899 941 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 ZBED1O96006 694 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 MAOBP27338 520 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 TKTL1P51854 596 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 YWHAGP61981 247 aaKnown RBP eCLIP12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 GFPT1Q06210 699 aaPredicted RBP12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 PDE4CQ08493 712 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 PNOCQ13519 176 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 PKDCCQ504Y2 493 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 ANKRD40Q6AI12 368 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 CPXM2Q8N436 756 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 TTC39CQ8N584 583 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 MINDY1Q8N5J2 469 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 UBR7Q8N806 425 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 SORCS1Q8WY21 1168 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 DNASE2BQ8WZ79 361 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 GTPBP2Q9BX10 602 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 ADAM33Q9BZ11 813 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 ULBP1Q9BZM6 244 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 FAM124BQ9H5Z6 455 aaPredicted RBP12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 DNAAF2Q9NVR5 837 aaKnown RBP12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 ELOVL2Q9NXB9 296 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 ZMIZ1Q9ULJ6 1067 aa12.8□□□□□ -0.36
MTHFD1-207ENST00000554677 TMEM131Q92545 1883 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 XPO1O14980 1071 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 NPC1O15118 1278 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 ZBTB24O43167 697 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 HYAL3O43820 417 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 EPB41P11171 864 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 CD6P30203 668 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 COPAP53621 1224 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 ZNF234Q14588 700 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 COBLL1Q53SF7 1204 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 KIAA1324Q6UXG2 1013 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 FMR1NBQ8N0W7 255 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 ARHGAP18Q8N392 663 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 ENGASEQ8NFI3 743 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 SPATA20Q8TB22 786 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 TOE1Q96GM8 510 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 SLC32A1Q9H598 525 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 PRDM16Q9HAZ2 1276 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 ACACAQ13085 2346 aa12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 MUC22E2RYF6 1773 aaPredicted RBP12.79□□□□□ -0.36
MTHFD1-207ENST00000554677 ANKRD11Q6UB99 2663 aaPredicted RBP12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 DOCK9Q9BZ29 2069 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 YJEFN3A6XGL0 299 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 E7ENQ6 273 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 STX10O60499 249 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 OPHN1O60890 802 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 NDUFS2O75306 463 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 C7P10643 843 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 NCAM1P13591 858 aa12.78□□□□□ -0.36
MTHFD1-207ENST00000554677 PRKCHP24723 683 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms