RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 KRI1Q8N9T8 703 aaKnown RBP9.56□□□□□ -0.88
PRKCH-208ENST00000553846 FAM184AQ8NB25 1140 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 OR6B3Q8NGW1 331 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 SORCS1Q8WY21 1168 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 BAP1Q92560 729 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 ZNF516Q92618 1163 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 FGF11Q92914 225 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 BHMTQ93088 406 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 SMARCD1Q96GM5 515 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 TMEM176AQ96HP8 235 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 MMS19Q96T76 1030 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 SDCBP2Q9H190 292 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 SNX25Q9H3E2 840 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 SMYD3Q9H7B4 428 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 EBF2Q9HAK2 575 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 KRT82Q9NSB4 513 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.56□□□□□ -0.88
PRKCH-208ENST00000553846 ELOVL2Q9NXB9 296 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 TBC1D7Q9P0N9 293 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 SCML2Q9UQR0 700 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 NYNRINQ9P2P1 1898 aaKnown RBP9.55□□□□□ -0.88
PRKCH-208ENST00000553846 A8MXQ7 604 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 B8ZZF3 427 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 KIAA0391O15091 583 aaKnown RBP9.55□□□□□ -0.88
PRKCH-208ENST00000553846 MDM4O15151 490 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 CYP26A1O43174 497 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 DFNA5O60443 496 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 GCNT3O95395 438 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 SEMA4FO95754 770 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 TNNC2P02585 160 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 CDK4P11802 303 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 JUPP14923 745 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 CDH8P55286 799 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 ALCAMQ13740 583 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 TEAD4Q15561 434 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 WDR72Q3MJ13 1102 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 SCD5Q86SK9 330 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 FAM124AQ86V42 546 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 GATAD2AQ86YP4 633 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 ZC3H3Q8IXZ2 948 aaKnown RBP9.55□□□□□ -0.88
PRKCH-208ENST00000553846 ZNF276Q8N554 614 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 OR2T3Q8NH03 318 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 EPSTI1Q96J88 318 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 CNDP2Q96KP4 475 aaKnown RBP9.55□□□□□ -0.88
PRKCH-208ENST00000553846 ELF4Q99607 663 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-208ENST00000553846 CGRRF1Q99675 332 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.55□□□□□ -0.88
PRKCH-208ENST00000553846 STK17AQ9UEE5 414 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 MYO9AB2RTY4 2548 aa9.55□□□□□ -0.88
PRKCH-208ENST00000553846 USP9YO00507 2555 aaPredicted RBP9.55□□□□□ -0.88
PRKCH-208ENST00000553846 A0A1W2PR77 199 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 ZNF233A6NK53 670 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 AP1G2O75843 785 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 DXOO77932 396 aaKnown RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 PRPF6O94906 941 aaKnown RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 C6P13671 934 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 CCDC130P13994 396 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 EPHA8P29322 1005 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 ATP5C1P36542 298 aaKnown RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 MYL6P60660 151 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 RPS14P62263 151 aaKnown RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 RACK1P63244 317 aaKnown RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 CXADRP78310 365 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 RHDQ02161 417 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 CCDC173Q0VFZ6 552 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 KCNJ12Q14500 433 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 PSMD6Q15008 389 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 SURF1Q15526 300 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 INAVAQ3KP66 663 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 ANKS1BQ7Z6G8 1248 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 KIAA0907Q7Z7F0 614 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 FAM181AQ8N9Y4 354 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 PLEKHO2Q8TD55 490 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 SNX19Q92543 992 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 ZSCAN31Q96LW9 406 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 SLC6A18Q96N87 628 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 LHX5Q9H2C1 402 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
PRKCH-208ENST00000553846 HSPBP1Q9NZL4 362 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 HMGXB4Q9UGU5 601 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
PRKCH-208ENST00000553846 AHCTF1Q8WYP5 2266 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 A0A087X0B3 334 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 A0A1W2PQH9 124 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 WNT9AO14904 365 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 TGFB1I1O43294 461 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 SYNCRIPO60506 623 aaKnown RBP9.53□□□□□ -0.88
PRKCH-208ENST00000553846 WISP1O95388 367 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 LDOC1O95751 146 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-208ENST00000553846 EPHX1P07099 455 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 HOXD9P28356 352 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-208ENST00000553846 TNNC1P63316 161 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 SKOR1P84550 965 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 ZBTB16Q05516 673 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 CYP24A1Q07973 514 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 ILKQ13418 452 aa9.53□□□□□ -0.88
PRKCH-208ENST00000553846 SNRNP35Q16560 246 aaKnown RBP9.53□□□□□ -0.88
PRKCH-208ENST00000553846 PRAMEF14Q5SWL7 426 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms