RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 RFPL2O75678 378 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 TBX18O95935 607 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 F11P03951 625 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 GABRR2P28476 465 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 CCR1P32246 355 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 PTPN7P35236 360 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 ATP5C1P36542 298 aaKnown RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 CDKN2BP42772 138 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 NRIP1P48552 1158 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 ARSEP51690 589 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 CDH6P55285 790 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 TBX4P57082 545 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 SCAPQ12770 1279 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 PPP2R5DQ14738 602 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 TRIP4Q15650 581 aaPredicted RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 DPYSL2Q16555 572 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 CA9Q16790 459 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 LRIT3Q3SXY7 679 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 ZC3H12AQ5D1E8 599 aaKnown RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 TFDP3Q5H9I0 405 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 EFHC2Q5JST6 749 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 KLHDC10Q6PID8 442 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 TMEM150AQ86TG1 271 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 SLC13A5Q86YT5 568 aaPredicted RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 TMC8Q8IU68 726 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 MAP7D3Q8IWC1 876 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 FAM71BQ8TC56 605 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 MAIP1Q8WWC4 291 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 RPGRIP1Q96KN7 1286 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 GCNAQ96QF7 691 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 CDCA3Q99618 268 aaPredicted RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 LRRC3Q9BY71 257 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 NACA2Q9H009 215 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 DHX35Q9H5Z1 703 aaKnown RBP12.21□□□□□ -0.45
NEK9-202ENST00000553823 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 PCDH18Q9HCL0 1135 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.21□□□□□ -0.45
NEK9-202ENST00000553823 ZDHHC7Q9NXF8 308 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 DNMT3LQ9UJW3 386 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 TLR6Q9Y2C9 796 aa12.21□□□□□ -0.45
NEK9-202ENST00000553823 NUP205Q92621 2012 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 BRWD1Q9NSI6 2320 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 hCG_1818297A0A087WSY0 165 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 SLC12A8A0AV02 714 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 OAS1P00973 400 aaKnown RBP12.2□□□□□ -0.46
NEK9-202ENST00000553823 POU2F2P09086 479 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 CD48P09326 243 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 SLC2A3P11169 496 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 MYL4P12829 197 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 PTPN2P17706 415 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 CDC25CP30307 473 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 L1CAMP32004 1257 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 KPNA1P52294 538 aaPredicted RBP12.2□□□□□ -0.46
NEK9-202ENST00000553823 ITIH3Q06033 890 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 LLGL1Q15334 1064 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 TAZQ16635 292 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 GAREM2Q75VX8 874 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 ANKS1BQ7Z6G8 1248 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 VSIG1Q86XK7 387 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 MIB1Q86YT6 1006 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 LEMD2Q8NC56 503 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 MRPS31Q92665 395 aaKnown RBP12.2□□□□□ -0.46
NEK9-202ENST00000553823 SLC39A13Q96H72 371 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 KCTD15Q96SI1 283 aaPredicted RBP12.2□□□□□ -0.46
NEK9-202ENST00000553823 CORO1BQ9BR76 489 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 CALN1Q9BXU9 219 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 PRKD2Q9BZL6 878 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 TKTL2Q9H0I9 626 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 TMPRSS4Q9NRS4 437 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 ARHGEF38Q9NXL2 777 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 EFR3BQ9Y2G0 817 aa12.2□□□□□ -0.46
NEK9-202ENST00000553823 HBS1LQ9Y450 684 aaKnown RBP12.2□□□□□ -0.46
NEK9-202ENST00000553823 GOLGA6L10A0A0M3HER8 536 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 C2orf78A6NCI8 922 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 ZNF487B1APH4 448 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 I6L893 689 aaPredicted RBP12.19□□□□□ -0.46
NEK9-202ENST00000553823 KRIT1O00522 736 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 COCHO43405 550 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 TJP3O95049 919 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 FGF19O95750 216 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 APOEP02649 317 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 KRT10P13645 584 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 ARL4AP40617 200 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 EPHA5P54756 1037 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 RING1Q06587 406 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 MMRN1Q13201 1228 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 PPP6R3Q5H9R7 873 aaPredicted RBP12.19□□□□□ -0.46
NEK9-202ENST00000553823 ZNF697Q5TEC3 545 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 KAZNQ674X7 775 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 ADAT2Q7Z6V5 191 aaKnown RBP12.19□□□□□ -0.46
NEK9-202ENST00000553823 LRRN4CLQ8ND94 238 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 FCRL2Q96LA5 508 aaPredicted RBP12.19□□□□□ -0.46
NEK9-202ENST00000553823 HAPLN3Q96S86 360 aa12.19□□□□□ -0.46
NEK9-202ENST00000553823 ZNF670Q9BS34 389 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms