RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 PITX1P78337 314 aaPredicted RBP8.58□□□□□ -1.04
RDH11-205ENST00000553816 PDCLQ13371 301 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 CCINQ13939 588 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 TAF5Q15542 800 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 PTPN20Q4JDL3 420 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 TMEM196Q5HYL7 178 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 LY6G5CQ5SRR4 150 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 FKBP15Q5T1M5 1219 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 SYPL2Q5VXT5 272 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 HTR3DQ70Z44 454 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 TMEM110Q86TL2 294 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 DDX42Q86XP3 938 aaKnown RBP eCLIP8.58□□□□□ -1.04
RDH11-205ENST00000553816 TMEM25Q86YD3 366 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 CPA6Q8N4T0 437 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 C1orf131Q8NDD1 294 aaKnown RBP8.58□□□□□ -1.04
RDH11-205ENST00000553816 SLC20A1Q8WUM9 679 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 ATP2A3Q93084 1043 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 NELL2Q99435 816 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 ABCC13Q9NSE7 274 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 FAM86C1Q9NVL1 165 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 POLR3BQ9NW08 1133 aaPredicted RBP8.58□□□□□ -1.04
RDH11-205ENST00000553816 MARCH2Q9P0N8 246 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 NAALADL1Q9UQQ1 740 aa8.58□□□□□ -1.04
RDH11-205ENST00000553816 SLC12A8A0AV02 714 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 TRDMT1O14717 391 aaKnown RBP8.57□□□□□ -1.04
RDH11-205ENST00000553816 TRIM24O15164 1050 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 NFATC1O95644 943 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 LTFP02788 710 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 ERBB2P04626 1255 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 TPM2P07951 284 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 MMEP08473 750 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 RPS9P46781 194 aaKnown RBP8.57□□□□□ -1.04
RDH11-205ENST00000553816 MTAPQ13126 283 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 NR1I3Q14994 352 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 ANGPT1Q15389 498 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 MEA1Q16626 185 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 SKOR2Q2VWA4 1001 aaPredicted RBP8.57□□□□□ -1.04
RDH11-205ENST00000553816 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 TSSK4Q6SA08 328 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 TPGS1Q6ZTW0 290 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 FAM183BPQ6ZVS7 135 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 RSRC2Q7L4I2 434 aaKnown RBP8.57□□□□□ -1.04
RDH11-205ENST00000553816 C1orf210Q8IVY1 113 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 ARHGAP18Q8N392 663 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 NAT16Q8N8M0 369 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 ANKRD20A12PQ8NF67 263 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 NEK11Q8NG66 645 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 EPS8L1Q8TE68 723 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 STK32AQ8WU08 396 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 IRGQQ8WZA9 623 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 CD101Q93033 1021 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 MSANTD3Q96H12 275 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 PPP1R13BQ96KQ4 1090 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 PCMTD1Q96MG8 357 aaPredicted RBP8.57□□□□□ -1.04
RDH11-205ENST00000553816 P2RY13Q9BPV8 354 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 LHX5Q9H2C1 402 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 CHRDQ9H2X0 955 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 SPHK2Q9NRA0 654 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 TBC1D14Q9P2M4 693 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 NOCTQ9UK39 431 aaKnown RBP8.57□□□□□ -1.04
RDH11-205ENST00000553816 MRPS17Q9Y2R5 130 aaKnown RBP8.57□□□□□ -1.04
RDH11-205ENST00000553816 ZDBF2Q9HCK1 2354 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 MYO15AQ9UKN7 3530 aa8.57□□□□□ -1.04
RDH11-205ENST00000553816 A0A1B0GTH6 734 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 SLC9A3R1O14745 358 aaPredicted RBP8.56□□□□□ -1.04
RDH11-205ENST00000553816 NCAM2O15394 837 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 GRAP2O75791 330 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 FBXO21O94952 628 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 ADH5P11766 374 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 NCAM1P13591 858 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 CORO1AP31146 461 aaKnown RBP8.56□□□□□ -1.04
RDH11-205ENST00000553816 CDH5P33151 784 aaPredicted RBP8.56□□□□□ -1.04
RDH11-205ENST00000553816 KRT9P35527 623 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 SOX5P35711 763 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 ACADSBP45954 432 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 BPIFB4P59827 614 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 NOMO3P69849 1222 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 COG7P83436 770 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 FANCCQ00597 558 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 FMO1Q01740 532 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 SATB1Q01826 763 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 NHLH1Q02575 133 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 NR1H3Q13133 447 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 TRIP4Q15650 581 aaPredicted RBP8.56□□□□□ -1.04
RDH11-205ENST00000553816 MSANTD2Q6P1R3 559 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 DENND1CQ8IV53 801 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 ETFBKMTQ8IXQ9 262 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 PHTF2Q8N3S3 785 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 KIAA1958Q8N8K9 716 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 OLIG1Q8TAK6 271 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 ADAM32Q8TC27 787 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 DQX1Q8TE96 717 aaKnown RBP8.56□□□□□ -1.04
RDH11-205ENST00000553816 BHMTQ93088 406 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 FAM149B1Q96BN6 582 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 PCDHB18PQ96TA0 734 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 USB1Q9BQ65 265 aaKnown RBP8.56□□□□□ -1.04
RDH11-205ENST00000553816 KCNH6Q9H252 994 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 ZDHHC4Q9NPG8 344 aa8.56□□□□□ -1.04
RDH11-205ENST00000553816 SPATA6Q9NWH7 488 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms