RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MKS1Q9NXB0 559 aa7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 KCNK4Q9NYG8 393 aa7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 GPRC5DQ9NZD1 345 aa7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 HESX1Q9UBX0 185 aa7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 TUBGCP4Q9UGJ1 667 aa7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 AKT3Q9Y243 479 aa7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 BPTFQ12830 3046 aa7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 PDCD11Q14690 1871 aaKnown RBP7.17□□□□□ -1.26
LINC-ROR-201ENST00000553704 DNAJC25-GNG10A0A024R161 153 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 E2F8A0AVK6 867 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 WDR27A2RRH5 827 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 USP1O94782 785 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 ALDOAP04075 364 aaKnown RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 BPGMP07738 259 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 L1CAMP32004 1257 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 ARRB2P32121 409 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 GCKP35557 465 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 PGM1P36871 562 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 RPL10AP62906 217 aaKnown RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC6A3Q01959 620 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 ARHGAP1Q07960 439 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 TUBB3Q13509 450 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 FAM187BQ17R55 369 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SOWAHAQ2M3V2 549 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 TSNAXIP1Q2TAA8 658 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 WDR78Q5VTH9 848 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 NCBP2-AS2Q69YL0 99 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 KCNT2Q6UVM3 1135 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 NUDCD3Q8IVD9 361 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC25A41Q8N5S1 370 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 C7orf31Q8N865 590 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 STKLD1Q8NE28 680 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SCG3Q8WXD2 468 aaKnown RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 KIF12Q96FN5 646 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 QKIQ96PU8 341 aaKnown RBP eCLIP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 PANX3Q96QZ0 392 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 CCDC106Q9BWC9 280 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC4A5Q9BY07 1137 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 NFKBIZQ9BYH8 718 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SMARCAD1Q9H4L7 1026 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 ASB7Q9H672 318 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 STOML1Q9UBI4 398 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 ITGA11Q9UKX5 1188 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SNX9Q9Y5X1 595 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 PSAT1Q9Y617 370 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 MDM4O15151 490 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 LMNAP02545 664 aaKnown RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 PRKCGP05129 697 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 LGALS2P05162 132 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 P4HA1P13674 534 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 CCDC130P13994 396 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC34A1Q06495 639 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 OLIG2Q13516 323 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 BOLA3Q53S33 107 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 GLRA4Q5JXX5 417 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 NAIF1Q69YI7 327 aaPredicted RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 POTEAQ6S8J7 498 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 RIPOR1Q6ZS17 1223 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 MAVSQ7Z434 540 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 CDKL3Q8IVW4 592 aaPredicted RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 MAP7D3Q8IWC1 876 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 MCUQ8NE86 351 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 DEPDC1BQ8WUY9 529 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 SLC35F5Q8WV83 523 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 USP6NLQ92738 828 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 C18orf25Q96B23 403 aaPredicted RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 CSPG4P5Q96PW8 444 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 C11orf84Q9BUA3 381 aaPredicted RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 MMADHCQ9H3L0 296 aaPredicted RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 DTLQ9NZJ0 730 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 RBPJLQ9UBG7 517 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 RGS17Q9UGC6 210 aaPredicted RBP7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 AP4E1Q9UPM8 1137 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 HES2Q9Y543 173 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 PCDHA11Q9Y5I1 949 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 LTBP3Q9NS15 1303 aa7.16□□□□□ -1.26
LINC-ROR-201ENST00000553704 A0A0G2JLL6 359 aaPredicted RBP7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 EME2A4GXA9 379 aaPredicted RBP7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 TRDMT1O14717 391 aaKnown RBP7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 TPP1O14773 563 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 ADCY6O43306 1168 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 MFSD11O43934 449 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 GCATO75600 419 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 KRT38O76015 456 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 SORBS2O94875 1100 aaKnown RBP7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 FGF3P11487 239 aaPredicted RBP7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 GOT1P17174 413 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 TPSB2P20231 275 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 RAP1GDS1P52306 607 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 PITX1P78337 314 aaPredicted RBP7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 RBP5P82980 135 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 TNFAIP2Q03169 654 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 GRIK3Q13003 919 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 TPSAB1Q15661 275 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 DPYSL2Q16555 572 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 FASTKD1Q53R41 847 aaKnown RBP7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 MBLAC2Q68D91 279 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 TMEM154Q6P9G4 183 aa7.15□□□□□ -1.26
LINC-ROR-201ENST00000553704 PRRT2Q7Z6L0 340 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms