RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RAD54LQ92698 747 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 SKA1Q96BD8 255 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 ACCSQ96QU6 501 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 LLPHQ9BRT6 129 aaKnown RBP14.56□□□□□ -0.08
PRPF39-204ENST00000553605 STRA6Q9BX79 667 aa14.56□□□□□ -0.08
PRPF39-204ENST00000553605 TLR8Q9NR97 1041 aaKnown RBP14.56□□□□□ -0.08
PRPF39-204ENST00000553605 A8MXQ7 604 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 YKT6O15498 198 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 KLK10O43240 276 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 PRPF6O94906 941 aaKnown RBP14.55□□□□□ -0.08
PRPF39-204ENST00000553605 PENKP01210 267 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-204ENST00000553605 CKMT2P17540 419 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 DDIT3P35638 169 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 UBA7P41226 1012 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 NEK4P51957 841 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 CAMK2GQ13555 558 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-204ENST00000553605 EIF4HQ15056 248 aaKnown RBP14.55□□□□□ -0.08
PRPF39-204ENST00000553605 FYB2Q5VWT5 728 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 KDM7AQ6ZMT4 941 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 Q6ZNB5 142 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 ANKS1BQ7Z6G8 1248 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 SFR1Q86XK3 245 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 CCDC83Q8IWF9 413 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 KCNE4Q8WWG9 221 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 SORCS1Q8WY21 1168 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 PIWIL1Q96J94 861 aaKnown RBP14.55□□□□□ -0.08
PRPF39-204ENST00000553605 AK8Q96MA6 479 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 MED10Q9BTT4 135 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 TRIM4Q9C037 500 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 CIPCQ9C0C6 399 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 PCIF1Q9H4Z3 704 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 MRPL44Q9H9J2 332 aaKnown RBP14.55□□□□□ -0.08
PRPF39-204ENST00000553605 DMAP1Q9NPF5 467 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-204ENST00000553605 IGSF5Q9NSI5 407 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 ADAMTS1Q9UHI8 967 aa14.55□□□□□ -0.08
PRPF39-204ENST00000553605 MYH10P35580 1976 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 CKAP5Q14008 2032 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 TIMM44O43615 452 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 CST3P01034 146 aaPredicted RBP14.54□□□□□ -0.08
PRPF39-204ENST00000553605 PLA2G4AP47712 749 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 ARID5AQ03989 594 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 L1TD1Q5T7N2 865 aaKnown RBP14.54□□□□□ -0.08
PRPF39-204ENST00000553605 ARL6IP4Q66PJ3 421 aaKnown RBP14.54□□□□□ -0.08
PRPF39-204ENST00000553605 SYCP3Q8IZU3 236 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 LSMEM2Q8N112 164 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 RBBP8NLQ8NC74 664 aaPredicted RBP14.54□□□□□ -0.08
PRPF39-204ENST00000553605 SLC6A18Q96N87 628 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 CBWD1Q9BRT8 395 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 DPH1Q9BZG8 443 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 FAM117AQ9C073 453 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 FBXO44Q9H4M3 255 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 SGK2Q9HBY8 427 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 CYLDQ9NQC7 956 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 HEMK1Q9Y5R4 338 aaPredicted RBP14.54□□□□□ -0.08
PRPF39-204ENST00000553605 ATP8B3O60423 1300 aa14.54□□□□□ -0.08
PRPF39-204ENST00000553605 A0A1W2PPC4 97 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 MT-CO3P00414 261 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 DNTTP04053 509 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 WNT1P04628 370 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 IGHV4-34P06331 123 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 C7P10643 843 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 EPHA8P29322 1005 aaPredicted RBP14.53□□□□□ -0.08
PRPF39-204ENST00000553605 ARRB1P49407 418 aaPredicted RBP14.53□□□□□ -0.08
PRPF39-204ENST00000553605 TNNC1P63316 161 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 HMGN5P82970 282 aaKnown RBP14.53□□□□□ -0.08
PRPF39-204ENST00000553605 ZBTB16Q05516 673 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 BNIP3Q12983 259 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 SURF1Q15526 300 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 WDR72Q3MJ13 1102 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 RILPL1Q5EBL4 403 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 TMEM215Q68D42 235 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 KIAA0895LQ68EN5 471 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 PAQR9Q6ZVX9 377 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 TRAPPC11Q7Z392 1133 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 FAM35AQ86V20 835 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 GPD1LQ8N335 351 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 LARP4BQ92615 738 aaKnown RBP14.53□□□□□ -0.08
PRPF39-204ENST00000553605 GDF3Q9NR23 364 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 OSER1Q9NX31 292 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 TBC1D7Q9P0N9 293 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 PCDHB1Q9Y5F3 818 aa14.53□□□□□ -0.08
PRPF39-204ENST00000553605 UBR5O95071 2799 aaPredicted RBP14.52□□□□□ -0.08
PRPF39-204ENST00000553605 GCNT3O95395 438 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 MPOP05164 745 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 ACP1P24666 158 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 CHKAP35790 457 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 ERVPABLB-1P60509 514 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 RPS14P62263 151 aaKnown RBP14.52□□□□□ -0.09
PRPF39-204ENST00000553605 E2F1Q01094 437 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 GRIN1Q05586 938 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 NFATC3Q12968 1075 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 KIAA1614Q5VZ46 1190 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 DYMQ7RTS9 669 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 RASSF8Q8NHQ8 419 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 SMARCD1Q96GM5 515 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 SEL1LQ9UBV2 794 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 CLEC4EQ9ULY5 219 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 ZNF510Q9Y2H8 683 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 PCDHB13Q9Y5F0 798 aa14.52□□□□□ -0.09
PRPF39-204ENST00000553605 FAM47DPA6NHR8 397 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms