RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 E2F5Q15329 346 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 TOGARAM2Q6ZUX3 1019 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 DGLUCYQ7Z3D6 616 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 OLIG1Q8TAK6 271 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 STK32AQ8WU08 396 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 ZNF606Q8WXB4 792 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 SPACA7Q96KW9 195 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 SLC2A11Q9BYW1 496 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 ZDHHC4Q9NPG8 344 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 SFMBT1Q9UHJ3 866 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 HCN2Q9UL51 889 aa13.53□□□□□ -0.24
ACTN1-207ENST00000553290 TCRBV21S2A2A0A5A6 115 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 GFRA2O00451 464 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 PIK3R2O00459 728 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 NPC1O15118 1278 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 ZBTB24O43167 697 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-207ENST00000553290 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-207ENST00000553290 PON1P27169 355 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 GNA15P30679 374 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 MAN2A1Q16706 1144 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 DPCR1Q3MIW9 517 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 MPPE1Q53F39 396 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 CT47A1Q5JQC4 288 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-207ENST00000553290 EGFLAMQ63HQ2 1017 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 PMS2CLQ68D20 193 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 UNC45BQ8IWX7 931 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 CHPFQ8IZ52 775 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 NETO1Q8TDF5 533 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 CLEC4CQ8WTT0 213 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 DDI1Q8WTU0 396 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 HMGB4Q8WW32 186 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 RTKNQ9BST9 563 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 MIS12Q9H081 205 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 LMBRD1Q9NUN5 540 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 STOML2Q9UJZ1 356 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 INVSQ9Y283 1065 aa13.52□□□□□ -0.25
ACTN1-207ENST00000553290 THAP12O43422 761 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 MPLP40238 635 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 P2RY2P41231 377 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 WASP42768 502 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 ATXN1P54253 815 aaKnown RBP13.51□□□□□ -0.25
ACTN1-207ENST00000553290 RING1Q06587 406 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 ARHGAP44Q17R89 818 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 PLA2G2CQ5R387 149 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 ADGRF1Q5T601 910 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 NUGGCQ68CJ6 796 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 DENND1BQ6P3S1 775 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 ANKS1BQ7Z6G8 1248 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 SCUBE3Q8IX30 993 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 PGBD3Q8N328 593 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 C12orf50Q8NA57 414 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-207ENST00000553290 UCMAQ8WVF2 138 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 SHC3Q92529 594 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 P2RY11Q96G91 374 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 GABRG3Q99928 467 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 TRIM62Q9BVG3 475 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-207ENST00000553290 VPS45Q9NRW7 570 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 ABCA7Q8IZY2 2146 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 THADAQ6YHU6 1953 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 PLXND1Q9Y4D7 1925 aa13.51□□□□□ -0.25
ACTN1-207ENST00000553290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-207ENST00000553290 A0A1W2PQF6 199 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 BCLAF3A2AJT9 711 aaKnown RBP13.5□□□□□ -0.25
ACTN1-207ENST00000553290 BECN2A8MW95 431 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 MSI1O43347 362 aaKnown RBP13.5□□□□□ -0.25
ACTN1-207ENST00000553290 IGLV3-27P01718 113 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 NCAM1P13591 858 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 GABRG2P18507 467 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 USP8P40818 1118 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 SLC11A2P49281 568 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 CREB5Q02930 508 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 AASDHQ4L235 1098 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-207ENST00000553290 VWA3BQ502W6 1294 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 BEND5Q7L4P6 421 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 TMEM110Q86TL2 294 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 IPO4Q8TEX9 1081 aaKnown RBP13.5□□□□□ -0.25
ACTN1-207ENST00000553290 RLN3Q8WXF3 142 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 AZIN2Q96A70 460 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 FAM149B1Q96BN6 582 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 TMA16Q96EY4 203 aaKnown RBP13.5□□□□□ -0.25
ACTN1-207ENST00000553290 PIWIL1Q96J94 861 aaKnown RBP13.5□□□□□ -0.25
ACTN1-207ENST00000553290 SERPINB11Q96P15 392 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 ACOX2Q99424 681 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 TUBGCP2Q9BSJ2 902 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 SLC4A5Q9BY07 1137 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 NDST4Q9H3R1 872 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
ACTN1-207ENST00000553290 NUP205Q92621 2012 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 LAMA1P25391 3075 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 SLC30A4O14863 429 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 MAP3K13O43283 966 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 TIMM44O43615 452 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 TSPAN3O60637 253 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 ZNF217O75362 1048 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 CAVIN2O95810 425 aa13.49□□□□□ -0.25
ACTN1-207ENST00000553290 FYNP06241 537 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms