RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 SCNN1AP37088 669 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 SLC6A11P48066 632 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 HARS2P49590 506 aaKnown RBP14.7□□□□□ -0.06
PTCH1-226ENST00000553011 GALK1P51570 392 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 CDK17Q00537 523 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 ANO4Q32M45 955 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 TDRD12Q587J7 1177 aaKnown RBP14.7□□□□□ -0.06
PTCH1-226ENST00000553011 HGSNATQ68CP4 663 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 TRNP1Q6NT89 227 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 C1orf228Q6PIY5 440 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 MON1BQ7L1V2 547 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 PHF13Q86YI8 300 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-226ENST00000553011 SYN2Q92777 582 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-226ENST00000553011 P2RY11Q96G91 374 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 SLC39A13Q96H72 371 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 P2RY13Q9BPV8 354 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 ADAM33Q9BZ11 813 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 OSBPL6Q9BZF3 934 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 NUCKS1Q9H1E3 243 aaKnown RBP14.7□□□□□ -0.06
PTCH1-226ENST00000553011 FAM204AQ9H8W3 233 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 METTL5Q9NRN9 209 aaKnown RBP14.7□□□□□ -0.06
PTCH1-226ENST00000553011 RBM12Q9NTZ6 932 aaKnown RBP14.7□□□□□ -0.06
PTCH1-226ENST00000553011 ADAM22Q9P0K1 906 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 COX16Q9P0S2 106 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 DLGAP2Q9P1A6 1054 aa14.7□□□□□ -0.06
PTCH1-226ENST00000553011 TMCO5BA8MYB1 307 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 DDX3XO00571 662 aaKnown RBP eCLIP14.69□□□□□ -0.06
PTCH1-226ENST00000553011 TRDMT1O14717 391 aaKnown RBP14.69□□□□□ -0.06
PTCH1-226ENST00000553011 PLEKP08567 350 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-226ENST00000553011 CHRNB1P11230 501 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 TFE3P19532 575 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-226ENST00000553011 NOS2P35228 1153 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 FLT3P36888 993 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 MATKP42679 507 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 AMPD2Q01433 879 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 GAD2Q05329 585 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 RING1Q06587 406 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 MESP2Q0VG99 397 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 NNTQ13423 1086 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 ZC3H12AQ5D1E8 599 aaKnown RBP14.69□□□□□ -0.06
PTCH1-226ENST00000553011 OTUD1Q5VV17 481 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-226ENST00000553011 ACAD10Q6JQN1 1059 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 FSTL4Q6MZW2 842 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 DNAAF5Q86Y56 855 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 FAM217AQ8IXS0 508 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 NAT16Q8N8M0 369 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 CD101Q93033 1021 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 BHMTQ93088 406 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 CLDN23Q96B33 292 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 LMAN1LQ9HAT1 526 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 DDIT4Q9NX09 232 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.69□□□□□ -0.06
PTCH1-226ENST00000553011 TMEM59LQ9UK28 342 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 TLR6Q9Y2C9 796 aa14.69□□□□□ -0.06
PTCH1-226ENST00000553011 GOLGA6L7A0A1B0GV03 622 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 NEDD8-MDP1E9PL57 170 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 NCAM2O15394 837 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 HOXC11O43248 304 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-226ENST00000553011 MOCS2O96007 188 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-226ENST00000553011 EGFP01133 1207 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 SERPING1P05155 500 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 CALB1P05937 261 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 SULT1E1P49888 294 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 KDSRQ06136 332 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
PTCH1-226ENST00000553011 EIF4EBP2Q13542 120 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-226ENST00000553011 TRIM14Q14142 442 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 TMEM196Q5HYL7 178 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 NUGGCQ68CJ6 796 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 NADSYN1Q6IA69 706 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 TMC6Q7Z403 805 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 UNC45BQ8IWX7 931 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 MCOLN2Q8IZK6 566 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 EMC1Q8N766 993 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 JOSD2Q8TAC2 188 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 NPY6RQ99463 290 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 BBS2Q9BXC9 721 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 PLK2Q9NYY3 685 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 MARK1Q9P0L2 795 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 CALCOCO1Q9P1Z2 691 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 WDR35Q9P2L0 1181 aa14.68□□□□□ -0.06
PTCH1-226ENST00000553011 XPO7Q9UIA9 1087 aaKnown RBP14.68□□□□□ -0.06
PTCH1-226ENST00000553011 M0QYT0 321 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 TRIM24O15164 1050 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 ACSL4O60488 711 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 TSPAN3O60637 253 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 TULP3O75386 442 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 LATS1O95835 1130 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 APOEP02649 317 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 TYRP14679 529 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 CHKAP35790 457 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 ZNF75DP51815 510 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 GSCP56915 257 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-226ENST00000553011 GRSF1Q12849 480 aaKnown RBP eCLIP14.67□□□□□ -0.06
PTCH1-226ENST00000553011 NME3Q13232 169 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 CCINQ13939 588 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 ADGRF1Q5T601 910 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 RFWD3Q6PCD5 774 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 Q6ZS52 159 aa14.67□□□□□ -0.06
PTCH1-226ENST00000553011 SFTPA1Q8IWL2 248 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms