RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 WISP1O95388 367 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 LDOC1O95751 146 aaPredicted RBP11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 TBX18O95935 607 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 CXADRP78310 365 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 CCDC173Q0VFZ6 552 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 KCNH2Q12809 1159 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 SHBQ15464 509 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 GEN1Q17RS7 908 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 TBC1D25Q3MII6 688 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 TAF1BQ53T94 588 aaPredicted RBP11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 RILPL1Q5EBL4 403 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 HES3Q5TGS1 186 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 LAYNQ6UX15 382 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 FAM181AQ8N9Y4 354 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 B3GALNT2Q8NCR0 500 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 TMC2Q8TDI7 906 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 RFFLQ8WZ73 363 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 TTC9Q92623 222 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 BIRC7Q96CA5 298 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 PIWIL1Q96J94 861 aaKnown RBP11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 MMS19Q96T76 1030 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 HNRNPABQ99729 332 aaKnown RBP11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 CYLDQ9NQC7 956 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 PLK2Q9NYY3 685 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 SEL1LQ9UBV2 794 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 EXOC7Q9UPT5 735 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 MTMR6Q9Y217 621 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 FLNCQ14315 2725 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 H3BQV1 296 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 PYCARD-AS1I3L0S3 204 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 SYNCRIPO60506 623 aaKnown RBP11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 F13A1P00488 732 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 CST3P01034 146 aaPredicted RBP11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 C6P13671 934 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 PRKCHP24723 683 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 CD27P26842 260 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 ACTN2P35609 894 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 UBA7P41226 1012 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 SLC5A3P53794 718 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 IL9RQ01113 521 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 DNAJC3Q13217 504 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 CAMK2GQ13555 558 aaPredicted RBP11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 ZNF234Q14588 700 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 DUOXA2Q1HG44 320 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 FYB2Q5VWT5 728 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 DYMQ7RTS9 669 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 FAM124AQ86V42 546 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 ZMIZ2Q8NF64 920 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 OR6B3Q8NGW1 331 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 SNRNP27Q8WVK2 155 aaKnown RBP11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 SNX19Q92543 992 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 LARP4BQ92615 738 aaKnown RBP11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 DNAJC19Q96DA6 116 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 GBP4Q96PP9 640 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 OSER1Q9NX31 292 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 ELOVL2Q9NXB9 296 aa11.98□□□□□ -0.49
SUPT16H-202ENST00000552829 C10orf142B7Z368 130 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 VILLO15195 856 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 TNNC2P02585 160 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 ACADMP11310 421 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 PDCP20941 246 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 CASP5P51878 434 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 CDH8P55286 799 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 SURF1Q15526 300 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 TMEM215Q68D42 235 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 MCTP1Q6DN14 999 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 KLHDC10Q6PID8 442 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 GATAD2AQ86YP4 633 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 GPD1LQ8N335 351 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 OR2T3Q8NH03 318 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 SAP25Q8TEE9 199 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 UCMAQ8WVF2 138 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 HIC2Q96JB3 615 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 PCIF1Q9H4Z3 704 aa11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 MRPL44Q9H9J2 332 aaKnown RBP11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 DMAP1Q9NPF5 467 aaPredicted RBP11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 LSM7Q9UK45 103 aaKnown RBP11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 R3HCC1Q9Y3T6 440 aaKnown RBP11.97□□□□□ -0.49
SUPT16H-202ENST00000552829 GPR37O15354 613 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 SEMA4FO95754 770 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 KLKB1P03952 638 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 GAP43P17677 238 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 ATP5C1P36542 298 aaKnown RBP11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 RACK1P63244 317 aaKnown RBP11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 FOXK1P85037 733 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 GRIN1Q05586 938 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 ILKQ13418 452 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 LY6DQ14210 128 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 EIF4HQ15056 248 aaKnown RBP11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 E2F5Q15329 346 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 PRAMEF14Q5SWL7 426 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 WDR49Q8IV35 697 aa11.96□□□□□ -0.49
SUPT16H-202ENST00000552829 DCBLD1Q8N8Z6 715 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms