RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 CTXN3Q4LDR2 81 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 RTP2Q5QGT7 225 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 EMC10Q5UCC4 262 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 DENND2CQ68D51 928 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 KCTD16Q68DU8 428 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
PFDN5-216ENST00000552341 VSTM1Q6UX27 236 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 TAS1R1Q7RTX1 841 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 SCD5Q86SK9 330 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 SH2D3CQ8N5H7 860 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 TTC9BQ8N6N2 239 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 GOLGA6L1Q8N7Z2 621 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 RNF139Q8WU17 664 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 ARMC5Q96C12 935 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 TMEM109Q9BVC6 243 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 DNAJC17Q9NVM6 304 aaKnown RBP11.25□□□□□ -0.61
PFDN5-216ENST00000552341 DDIT4Q9NX09 232 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 IL37Q9NZH6 218 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 DTLQ9NZJ0 730 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 SHOC2Q9UQ13 582 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 GREB1Q4ZG55 1949 aa11.25□□□□□ -0.61
PFDN5-216ENST00000552341 SF3B1O75533 1304 aaKnown RBP eCLIP11.24□□□□□ -0.619e-9■■■■■ 62.4
PFDN5-216ENST00000552341 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-216ENST00000552341 OR6C75A6NL08 312 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 F9P00740 461 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 MYZAPP0CAP1 466 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 ZFXP17010 805 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-216ENST00000552341 ITGB8P26012 769 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 RBL1P28749 1068 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 ACTN2P35609 894 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 MAGEA11P43364 429 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 CTCFP49711 727 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-216ENST00000552341 XRCC4Q13426 336 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 KYNUQ16719 465 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 FAM182AQ5T1J6 154 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 ANKRD22Q5VYY1 191 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 ZNF280DQ6N043 979 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 FBXO46Q6PJ61 603 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-216ENST00000552341 TAC4Q86UU9 113 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 CEP57Q86XR8 500 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 DQX1Q8TE96 717 aaKnown RBP11.24□□□□□ -0.61
PFDN5-216ENST00000552341 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.615e-6■□□□□ 8.6
PFDN5-216ENST00000552341 CWH43Q9H720 699 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 PRDM16Q9HAZ2 1276 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 NMUR1Q9HB89 426 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.24□□□□□ -0.61
PFDN5-216ENST00000552341 NINJ2Q9NZG7 142 aa11.24□□□□□ -0.61
PFDN5-216ENST00000552341 TCRBV7S3A2A0A539 114 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 FAM92AA1XBS5 289 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 H7C0C1 242 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 DCLK1O15075 740 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 DGKIO75912 1065 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 ARL4AP40617 200 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 ATP5OP48047 213 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 GJA8P48165 433 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 GPR15P49685 360 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 YWHAGP61981 247 aaKnown RBP eCLIP11.23□□□□□ -0.61
PFDN5-216ENST00000552341 USP46P62068 366 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 GAD2Q05329 585 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 DDR2Q16832 855 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 EFHC2Q5JST6 749 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 ARTNQ5T4W7 220 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 SDHAF4Q5VUM1 108 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 CNKSR3Q6P9H4 555 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 KCNT2Q6UVM3 1135 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 RFX8Q6ZV50 586 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 PCGF5Q86SE9 256 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 SRLQ86TD4 932 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 HOOK3Q86VS8 718 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 RNF168Q8IYW5 571 aaPredicted RBP11.23□□□□□ -0.61
PFDN5-216ENST00000552341 LRRC43Q8N309 656 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 DNAJC5GQ8N7S2 189 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 ATAD1Q8NBU5 361 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 STKLD1Q8NE28 680 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 VN1R3Q9BXE9 311 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 ABCC13Q9NSE7 274 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 TMEM39AQ9NV64 488 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 OSER1Q9NX31 292 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 ATP11BQ9Y2G3 1177 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 PCDHB5Q9Y5E4 795 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 CFAP69A5D8W1 941 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
PFDN5-216ENST00000552341 KCNN4O15554 427 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 TMEM63AO94886 807 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 UPP2O95045 317 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 ACSL3O95573 720 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 CLTBP09497 229 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 MAGEA4P43358 317 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 HCAR3P49019 387 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 GPR17Q13304 367 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 IKBKEQ14164 716 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 PAFAH1B3Q15102 231 aaKnown RBP11.23□□□□□ -0.61
PFDN5-216ENST00000552341 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 KRT71Q3SY84 523 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
PFDN5-216ENST00000552341 SCN4BQ8IWT1 228 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms