RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NAT16Q8N8M0 369 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 RNF214Q8ND24 703 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 ADAM32Q8TC27 787 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 ATOH1Q92858 354 aaPredicted RBP19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 BHMTQ93088 406 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 NUP58Q9BVL2 599 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 ARHGEF4Q9NR80 690 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 MARK1Q9P0L2 795 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 DEC1Q9P2X7 70 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 TLR6Q9Y2C9 796 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 LRRC53A6NM62 1247 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 CBFA2T2O43439 604 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 RNF40O75150 1001 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 DAB1O75553 588 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 TRUB2O95900 331 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 CHRNB2P17787 502 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 GBP1P32455 592 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 NSFP46459 744 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 ZNF445P59923 1031 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 SFMBT2Q5VUG0 894 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 SYPL2Q5VXT5 272 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 GRAMD4Q6IC98 578 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 DEFB106AQ8N104 65 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 CPXM2Q8N436 756 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 SPEM1Q8N4L4 309 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 BAP1Q92560 729 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 FAM122AQ96E09 287 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC2A13Q96QE2 648 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 EDEM3Q9BZQ6 932 aa19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 FBRSL1Q9HCM7 1045 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 DNAJC17Q9NVM6 304 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-216ENST00000552301 SYNJ2BP-COX16A0A087WUM0 186 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 GOLGA8SH3BPF8 625 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 IRAK2O43187 625 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 CACNG3O60359 315 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 ATG13O75143 517 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 TULP3O75386 442 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 KAT7O95251 611 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 IGLV3-27P01718 113 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 CYP1A1P04798 512 aaPredicted RBP19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 SCNN1AP37088 669 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 GRIA2P42262 883 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 GABRB2P47870 512 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 CXCL12P48061 93 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC6A11P48066 632 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 RNASE9P60153 205 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 MMS22LQ6ZRQ5 1243 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 ETFBKMTQ8IXQ9 262 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 ZNF397Q8NF99 534 aaPredicted RBP19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 DDI1Q8WTU0 396 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 IQCDQ96DY2 449 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 AGPAT1Q99943 283 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 DDX50Q9BQ39 737 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 C11orf70Q9BRQ4 267 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 DDIT4Q9NX09 232 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 COX16Q9P0S2 106 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 FBXO4Q9UKT5 387 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 STAP1Q9ULZ2 295 aa19.23■□□□□ 0.67
PRPF40B-216ENST00000552301 ATG2BQ96BY7 2078 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 MOCS2O96007 188 aaPredicted RBP19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 CSTF1Q05048 431 aaKnown RBP19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 FIGNQ5HY92 759 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 ADGRF1Q5T601 910 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 XYLT1Q86Y38 959 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 RNF34Q969K3 372 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 ACDQ96AP0 544 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 FCRL2Q96LA5 508 aaPredicted RBP19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 RRN3Q9NYV6 651 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 PLK2Q9NYY3 685 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC12A6Q9UHW9 1150 aa19.22■□□□□ 0.67
PRPF40B-216ENST00000552301 TYW5A2RUC4 315 aaKnown RBP19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 TBC1D3BA6NDS4 549 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 ACSL4O60488 711 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC2A3P11169 496 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 TNFAIP3P21580 790 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 MMP8P22894 467 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 NOS2P35228 1153 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 DGKGP49619 791 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 SEC13P55735 322 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 GAS6Q14393 721 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 CLEC16AQ2KHT3 1053 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 MPPE1Q53F39 396 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 C2CD6Q53TS8 623 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 MAMSTRQ6ZN01 415 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 FAM217AQ8IXS0 508 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 RPLP0P6Q8NHW5 317 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC30A5Q8TAD4 765 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 XPO4Q9C0E2 1151 aaKnown RBP19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 TTYH3Q9C0H2 523 aa19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 NUCKS1Q9H1E3 243 aaKnown RBP19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 PRMT8Q9NR22 394 aaPredicted RBP19.21■□□□□ 0.67
PRPF40B-216ENST00000552301 TSPAN3O60637 253 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 PENKP01210 267 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 IGLV3-25P01717 112 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 CALB1P05937 261 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 UNGP13051 313 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 PBX1P40424 430 aa19.2■□□□□ 0.66
PRPF40B-216ENST00000552301 MATKP42679 507 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms