RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 ZNF558Q96NG5 402 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 RAD9AQ99638 391 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 AGPAT1Q99943 283 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 GDF15Q99988 308 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 RTP3Q9BQQ7 232 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 NT5C1AQ9BXI3 368 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 GPR62Q9BZJ7 368 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 SNX25Q9H3E2 840 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 DPEP3Q9H4B8 488 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 NSUN3Q9H649 340 aaKnown RBP8.53□□□□□ -1.04
BEST3-211ENST00000552295 SPTLC3Q9NUV7 552 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 DSEQ9UL01 958 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 EPN1Q9Y6I3 576 aaPredicted RBP8.53□□□□□ -1.04
BEST3-211ENST00000552295 CAPN6Q9Y6Q1 641 aa8.53□□□□□ -1.04
BEST3-211ENST00000552295 SF3B1O75533 1304 aaKnown RBP eCLIP8.53□□□□□ -1.04
BEST3-211ENST00000552295 LCHNA4D1U4 455 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 A8MXQ7 604 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 EIF3CLB5ME19 914 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 H0YGN5 161 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 SYN3O14994 580 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 THAP12O43422 761 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 AKR1B10O60218 316 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 ATP2C2O75185 946 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 CELA3AP09093 270 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 PDGFRBP09619 1106 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 VDRP11473 427 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 CD19P15391 556 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 TNFAIP3P21580 790 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 ACAT1P24752 427 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 CYLC1P35663 651 aaPredicted RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 MAPK8P45983 427 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 LHX1P48742 406 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 GFPT1Q06210 699 aaPredicted RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 ELAVL2Q12926 359 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 SLBPQ14493 270 aaKnown RBP eCLIP8.52□□□□□ -1.05
BEST3-211ENST00000552295 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 SLC18A3Q16572 532 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 SPOUT1Q5T280 376 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 FAM171A1Q5VUB5 890 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 FAM109BQ6ICB4 259 aaPredicted RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 OVOS1Q6IE37 1185 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 THAP5Q7Z6K1 395 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 VPS36Q86VN1 386 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 METTL23Q86XA0 190 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 PALB2Q86YC2 1186 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 FIBCD1Q8N539 461 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 ACRBPQ8NEB7 543 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 PLPPR2Q96GM1 343 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 DIRC2Q96SL1 478 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 PCDHB18PQ96TA0 734 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 EIF3CQ99613 913 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 DESI2Q9BSY9 194 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.52□□□□□ -1.05
BEST3-211ENST00000552295 VN1R3Q9BXE9 311 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 WNT10AQ9GZT5 417 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 DEF6Q9H4E7 631 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 CRTAC1Q9NQ79 661 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 DDX43Q9NXZ2 648 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 ADAMTS1Q9UHI8 967 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 PUF60Q9UHX1 559 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.52□□□□□ -1.05
BEST3-211ENST00000552295 REXO2Q9Y3B8 237 aaKnown RBP8.52□□□□□ -1.05
BEST3-211ENST00000552295 ST14Q9Y5Y6 855 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 PATJQ8NI35 1801 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 MYH10P35580 1976 aa8.52□□□□□ -1.05
BEST3-211ENST00000552295 KRTAP9-7A8MTY7 169 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 GRXCR1A8MXD5 290 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 O00370 1275 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 MED7O43513 233 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 OAZ2O95190 189 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 CBX7O95931 251 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 CYP1A1P04798 512 aaPredicted RBP8.51□□□□□ -1.05
BEST3-211ENST00000552295 PTPN1P18031 435 aaKnown RBP8.51□□□□□ -1.05
BEST3-211ENST00000552295 PCSK1P29120 753 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 RABGGTBP53611 331 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 PSMC1P62191 440 aaKnown RBP8.51□□□□□ -1.05
BEST3-211ENST00000552295 ETF1P62495 437 aaKnown RBP8.51□□□□□ -1.05
BEST3-211ENST00000552295 YWHAHQ04917 246 aaPredicted RBP8.51□□□□□ -1.05
BEST3-211ENST00000552295 MRPL58Q14197 206 aaKnown RBP8.51□□□□□ -1.05
BEST3-211ENST00000552295 CCDC142Q17RM4 750 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 ARHGAP17Q68EM7 881 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 LETMD1Q6P1Q0 360 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.51□□□□□ -1.05
BEST3-211ENST00000552295 TAS1R1Q7RTX1 841 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 C12orf29Q8N999 325 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 B3GALNT2Q8NCR0 500 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 OR10T2Q8NGX3 314 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 KIAA1524Q8TCG1 905 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 TNIP3Q96KP6 325 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 B3GALT6Q96L58 329 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 ALPK1Q96QP1 1244 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 PKMYT1Q99640 499 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 SYT15Q9BQS2 421 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 ACBD6Q9BR61 282 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 FAM49BQ9NUQ9 324 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 TAS2R14Q9NYV8 317 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 SPG21Q9NZD8 308 aa8.51□□□□□ -1.05
BEST3-211ENST00000552295 CDH9Q9ULB4 789 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms