RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SKILP12757 684 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 MMP8P22894 467 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 CORO1AP31146 461 aaKnown RBP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 CASP14P31944 242 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 NOS2P35228 1153 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 SCNN1AP37088 669 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 PRKCIP41743 596 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 GALK1P51570 392 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 GRSF1Q12849 480 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 TRIM14Q14142 442 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 CLEC16AQ2KHT3 1053 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 ANO4Q32M45 955 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 LY6G5CQ5SRR4 150 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 NUGGCQ68CJ6 796 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 ACAD10Q6JQN1 1059 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 OLFML1Q6UWY5 402 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 SLC26A9Q7LBE3 791 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 SLC30A5Q8TAD4 765 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 DQX1Q8TE96 717 aaKnown RBP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 P2RY13Q9BPV8 354 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 FOXQ1Q9C009 403 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 LMAN1LQ9HAT1 526 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 SPHK2Q9NRA0 654 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 TMEM51Q9NW97 253 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 DLL3Q9NYJ7 618 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 RRN3Q9NYV6 651 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 ADAM22Q9P0K1 906 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 SLC12A6Q9UHW9 1150 aa11.07□□□□□ -0.64
PTCH1-225ENST00000551845 AGO1Q9UL18 857 aaKnown RBP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 NDRG2Q9UN36 371 aaKnown RBP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 MTF2Q9Y483 593 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-225ENST00000551845 DOCK8Q8NF50 2099 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 SHISA7A6NL88 538 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 TRUB2O95900 331 aaKnown RBP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 CYBBP04839 570 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 SLC2A3P11169 496 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 GZMAP12544 262 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 MATKP42679 507 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 SLC11A2P49281 568 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 CENPCQ03188 943 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 RING1Q06587 406 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 NNTQ13423 1086 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 PON2Q15165 354 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 PREPLQ4J6C6 727 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 C2CD6Q53TS8 623 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 DGKKQ5KSL6 1271 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 FAM102AQ5T9C2 384 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 SARM1Q6SZW1 724 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 Q6ZNB5 142 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 MMS22LQ6ZRQ5 1243 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 TPGS1Q6ZTW0 290 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 NUDT18Q6ZVK8 323 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 VPS36Q86VN1 386 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 GAS2L3Q86XJ1 694 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 XYLT1Q86Y38 959 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 PHF13Q86YI8 300 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 VSTM4Q8IW00 320 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 PJA1Q8NG27 643 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 OR8K1Q8NGG5 319 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 CCDC26Q8TAB7 109 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 CD101Q93033 1021 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 RNF34Q969K3 372 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 AZIN2Q96A70 460 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 SLC2A13Q96QE2 648 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 XPO6Q96QU8 1125 aaKnown RBP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 DDX50Q9BQ39 737 aaKnown RBP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 ZNHIT6Q9NWK9 470 aaKnown RBP11.06□□□□□ -0.64
PTCH1-225ENST00000551845 STAP1Q9ULZ2 295 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 TLR6Q9Y2C9 796 aa11.06□□□□□ -0.64
PTCH1-225ENST00000551845 FAM170AA1A519 330 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-225ENST00000551845 GOLGA8SH3BPF8 625 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 MSI1O43347 362 aaKnown RBP11.05□□□□□ -0.64
PTCH1-225ENST00000551845 LATS1O95835 1130 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 F9P00740 461 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 GYPCP04921 128 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 CYP17A1P05093 508 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 SERPING1P05155 500 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 DCNP07585 359 aaKnown RBP11.05□□□□□ -0.64
PTCH1-225ENST00000551845 CHRNB1P11230 501 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 ADH5P11766 374 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 KRT3P12035 628 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 DRD1P21728 446 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 TARSP26639 723 aaKnown RBP11.05□□□□□ -0.64
PTCH1-225ENST00000551845 MAGEA9P43362 315 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 MTA1Q13330 715 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 LRRC32Q14392 662 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 TMEM196Q5HYL7 178 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 ADGRF1Q5T601 910 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 TXNDC11Q6PKC3 985 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 ARCQ7LC44 396 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 ZNF571Q7Z3V5 609 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-225ENST00000551845 SYNPOQ8N3V7 929 aa11.05□□□□□ -0.64
PTCH1-225ENST00000551845 CPXM2Q8N436 756 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms