RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TBC1D4O60343 1298 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 CPB1P15086 417 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 RPL17P18621 184 aaKnown RBP20.42■□□□□ 0.86
SSH1-209ENST00000551165 NFE2Q16621 373 aaPredicted RBP20.42■□□□□ 0.86
SSH1-209ENST00000551165 TP53INP2Q8IXH6 220 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 PGAP3Q96FM1 320 aaPredicted RBP20.42■□□□□ 0.86
SSH1-209ENST00000551165 A0A1W2PQH9 124 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 TCRBV7S3A2A0A539 114 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 GOLGA8MH3BSY2 632 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 RIPK2O43353 540 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 OPA1O60313 960 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 ACRP10323 421 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 SYCP2LQ5T4T6 812 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 SCML4Q8N228 414 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 DTLQ9NZJ0 730 aa20.42■□□□□ 0.86
SSH1-209ENST00000551165 ZNF487B1APH4 448 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 MSI1O43347 362 aaKnown RBP20.41■□□□□ 0.86
SSH1-209ENST00000551165 ARL4AP40617 200 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 CTCFP49711 727 aaPredicted RBP20.41■□□□□ 0.86
SSH1-209ENST00000551165 EFHC2Q5JST6 749 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 HP1BP3Q5SSJ5 553 aaPredicted RBP20.41■□□□□ 0.86
SSH1-209ENST00000551165 LRIG3Q6UXM1 1119 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 FUBP3Q96I24 572 aaKnown RBP eCLIP20.41■□□□□ 0.86
SSH1-209ENST00000551165 TTPALQ9BTX7 342 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 FAM129AQ9BZQ8 928 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 MTMR11A4FU01 709 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 OR6C75A6NL08 312 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 KCNN4O15554 427 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 ALDH7A1P49419 539 aaKnown RBP20.41■□□□□ 0.86
SSH1-209ENST00000551165 CXCR3P49682 368 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 C1QTNF8P60827 252 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 MTM1Q13496 603 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 SLMAPQ14BN4 828 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 GOLGA6L1Q8N7Z2 621 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 CCHCR1Q8TD31 782 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 CPT1BQ92523 772 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 CASP10Q92851 521 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 TKTL2Q9H0I9 626 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 CENPHQ9H3R5 247 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 WDCPQ9H6R7 721 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 ADAM21Q9UKJ8 722 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 CDY1Q9Y6F8 540 aa20.41■□□□□ 0.86
SSH1-209ENST00000551165 MYO16Q9Y6X6 1858 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 MFSD11O43934 449 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 ACSL3O95573 720 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 CAV1Q03135 178 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 KYNUQ16719 465 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 PSTKQ8IV42 348 aaKnown RBP20.4■□□□□ 0.86
SSH1-209ENST00000551165 NUP93Q8N1F7 819 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 BBOF1Q8ND07 529 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 TOP1MTQ969P6 601 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 C8orf48Q96LL4 319 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 SLC9A7Q96T83 725 aa20.4■□□□□ 0.86
SSH1-209ENST00000551165 FARP1Q9Y4F1 1045 aaPredicted RBP20.4■□□□□ 0.86
SSH1-209ENST00000551165 C2CD2LO14523 706 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 BANF1O75531 89 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 EFEMP2O95967 443 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 IGLV3-25P01717 112 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 DUSP4Q13115 394 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 SEMA3BQ13214 749 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 BTBD8Q5XKL5 378 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 DENND2CQ68D51 928 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 KCNT2Q6UVM3 1135 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 VSTM1Q6UX27 236 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 RFX8Q6ZV50 586 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 ZCCHC9Q8N567 271 aaKnown RBP20.39■□□□□ 0.86
SSH1-209ENST00000551165 PRCCQ92733 491 aaPredicted RBP20.39■□□□□ 0.86
SSH1-209ENST00000551165 NTAN1Q96AB6 310 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 C9orf72Q96LT7 481 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 SEPT5Q99719 369 aaPredicted RBP20.39■□□□□ 0.86
SSH1-209ENST00000551165 TMBIM4Q9HC24 238 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 PRDM10Q9NQV6 1147 aa20.39■□□□□ 0.86
SSH1-209ENST00000551165 MRPL42Q9Y6G3 142 aaKnown RBP20.39■□□□□ 0.86
SSH1-209ENST00000551165 EEF2KO00418 725 aaKnown RBP20.39■□□□□ 0.85
SSH1-209ENST00000551165 TIMP1P01033 207 aa20.39■□□□□ 0.85
SSH1-209ENST00000551165 SCAPQ12770 1279 aa20.39■□□□□ 0.85
SSH1-209ENST00000551165 GPR17Q13304 367 aa20.39■□□□□ 0.85
SSH1-209ENST00000551165 EIF4EBP2Q13542 120 aaPredicted RBP20.39■□□□□ 0.85
SSH1-209ENST00000551165 DPYSQ14117 519 aa20.39■□□□□ 0.85
SSH1-209ENST00000551165 FASTKD3Q14CZ7 662 aaKnown RBP20.39■□□□□ 0.85
SSH1-209ENST00000551165 SKIDA1Q1XH10 827 aa20.39■□□□□ 0.85
SSH1-209ENST00000551165 GOLGA6CA6NDK9 693 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 GOLGA8KD6RF30 607 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 GOLGA6DP0CG33 693 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 MGAT5BQ3V5L5 792 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 SPDYCQ5MJ68 293 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 RBM15Q96T37 977 aaKnown RBP eCLIP20.38■□□□□ 0.85
SSH1-209ENST00000551165 LGMNQ99538 433 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 ABCC13Q9NSE7 274 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 GOLGA6AQ9NYA3 693 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 GMIPQ9P107 970 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 H3BRJ5 948 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 TMEM63AO94886 807 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 NUDT17P0C025 328 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 STIP1P31948 543 aaKnown RBP20.38■□□□□ 0.85
SSH1-209ENST00000551165 DNAJC21Q5F1R6 531 aaKnown RBP20.38■□□□□ 0.85
SSH1-209ENST00000551165 FAXCQ5TGI0 409 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 ANKLE1Q8NAG6 615 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 CCDC110Q8TBZ0 833 aa20.38■□□□□ 0.85
SSH1-209ENST00000551165 RNF34Q969K3 372 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms