RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-218	ENST00000550692	USP33	Q8TEY7	942 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	STK32A	Q8WU08	396 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	BHMT	Q93088	406 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	BBS2	Q9BXC9	721 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	NAA15	Q9BXJ9	866 aa	Known RBP	11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	FAM126A	Q9BYI3	521 aa	Predicted RBP	11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	DCLK3	Q9C098	648 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	NUCKS1	Q9H1E3	243 aa	Known RBP	11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	SEMA4A	Q9H3S1	761 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	PLK2	Q9NYY3	685 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	MARK1	Q9P0L2	795 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	DEC1	Q9P2X7	70 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	TJP2	Q9UDY2	1190 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	MYO6	Q9UM54	1294 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	CAPN11	Q9UMQ6	739 aa		11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	LUC7L2	Q9Y383	392 aa	Known RBP	11.75	□□□□□ -0.53
BRF1-218	ENST00000550692	SPTBN4	Q9H254	2564 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	MYO18A	Q92614	2054 aa	Known RBP	11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	TBC1D3B	A6NDS4	549 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	NEDD8-MDP1	E9PL57	170 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	LMNA	P02545	664 aa	Known RBP	11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	APOD	P05090	189 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	CHRM1	P11229	460 aa	Predicted RBP	11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	GRIA2	P42262	883 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	ACADSB	P45954	432 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	PDCL	Q13371	301 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	TRIP4	Q15650	581 aa	Predicted RBP	11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	MSANTD2	Q6P1R3	559 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	TMC6	Q7Z403	805 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	TMEM110	Q86TL2	294 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	CCDC33	Q8N5R6	958 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	FAM149B1	Q96BN6	582 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	PLD4	Q96BZ4	506 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	GAN	Q9H2C0	597 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	ZDHHC4	Q9NPG8	344 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	DNAJC17	Q9NVM6	304 aa	Known RBP	11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	WDR35	Q9P2L0	1181 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	PCDHGC3	Q9UN70	934 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	SLC8A2	Q9UPR5	921 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	NAALADL1	Q9UQQ1	740 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	ZNF510	Q9Y2H8	683 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	HBS1L	Q9Y450	684 aa	Known RBP	11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	KIAA1549L	Q6ZVL6	1849 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	FAM186A	A6NE01	2351 aa		11.74	□□□□□ -0.53
BRF1-218	ENST00000550692	GOLGA6L6	A8MZA4	724 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	EPHB6	O15197	1021 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	HR	O43593	1189 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	CACNG3	O60359	315 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	CCDC172	P0C7W6	258 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	NCAM1	P13591	858 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	CYP11B1	P15538	503 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	HOXA6	P31267	233 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	KRT9	P35527	623 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	TIE1	P35590	1138 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	CHKA	P35790	457 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	STAT1	P42224	750 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	KIR2DL1	P43626	348 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	BPIFB4	P59827	614 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	ZBED6	P86452	979 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	TBX2	Q13207	712 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	SRSF5	Q13243	272 aa	Known RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	DMC1	Q14565	340 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	TSR1	Q2NL82	804 aa	Known RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	FYB2	Q5VWT5	728 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	SYPL2	Q5VXT5	272 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	GRAMD4	Q6IC98	578 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	WDR87	Q6ZQQ6	2873 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	SYT13	Q7L8C5	426 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	LONP2	Q86WA8	852 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	TERB1	Q8NA31	727 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	SUMF1	Q8NBK3	374 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	C1orf131	Q8NDD1	294 aa	Known RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	CCDC26	Q8TAB7	109 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	DQX1	Q8TE96	717 aa	Known RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	CPLX3	Q8WVH0	158 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	GOLGA1	Q92805	767 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	ACD	Q96AP0	544 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	PIWIL1	Q96J94	861 aa	Known RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	PPP1R13B	Q96KQ4	1090 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	XPO6	Q96QU8	1125 aa	Known RBP	11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	HHIP	Q96QV1	700 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	SPAG5	Q96R06	1193 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	CPXM1	Q96SM3	734 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	TTYH3	Q9C0H2	523 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	LHX5	Q9H2C1	402 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	NLRC4	Q9NPP4	1024 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	IMPACT	Q9P2X3	320 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	HCN2	Q9UL51	889 aa		11.73	□□□□□ -0.53
BRF1-218	ENST00000550692	PRRT4	C9JH25	899 aa		11.72	□□□□□ -0.53
BRF1-218	ENST00000550692		F8VZ95	297 aa		11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	SART1	O43290	800 aa	Known RBP	11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	PENK	P01210	267 aa	Predicted RBP	11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	CISD3	P0C7P0	127 aa		11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	CASP14	P31944	242 aa		11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	TNFRSF4	P43489	277 aa		11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	HARS2	P49590	506 aa	Known RBP	11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	MRPS21	P82921	87 aa	Known RBP	11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	TAF5	Q15542	800 aa		11.72	□□□□□ -0.53
BRF1-218	ENST00000550692	C10orf76	Q5T2E6	689 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms