RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 A0A1W2PQF6 199 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 PRRT4C9JH25 899 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 TRIM24O15164 1050 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 SYNCRIPO60506 623 aaKnown RBP11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 GABRG2P18507 467 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 MFAP3P55082 362 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 ARID5AQ03989 594 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 ADGRF1Q5T601 910 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 ENOSF1Q7L5Y1 443 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 ANKS1BQ7Z6G8 1248 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 FMNL3Q8IVF7 1028 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 UBA3Q8TBC4 463 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 SLC35F5Q8WV83 523 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 RLN3Q8WXF3 142 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 FOXJ1Q92949 421 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 DDX50Q9BQ39 737 aaKnown RBP11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 PLK2Q9NYY3 685 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 THAP10Q9P2Z0 257 aaPredicted RBP11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 SPAG17Q6Q759 2223 aa11.37□□□□□ -0.59
VTI1BP3-201ENST00000550220 CNOT1A5YKK6 2376 aaKnown RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 TPRP12270 2363 aaKnown RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 LNP1A1A4G5 178 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 ANTXRLA6NF34 631 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 YJEFN3A6XGL0 299 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 E7ENQ6 273 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 IRAK2O43187 625 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 MED7O43513 233 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 NDUFS2O75306 463 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 AFPP02771 609 aaKnown RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 OXTRP30559 389 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 ACADSBP45954 432 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 DAOAP59103 153 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 RPL6Q02878 288 aaKnown RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 MEA1Q16626 185 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 DUOXA1Q1HG43 343 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 TRIM61Q5EBN2 209 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 MPP7Q5T2T1 576 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 SYCP2LQ5T4T6 812 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 PEAR1Q5VY43 1037 aaPredicted RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 NUGGCQ68CJ6 796 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 SLC23A3Q6PIS1 610 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 TRIM59Q8IWR1 403 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 TMEFF1Q8IYR6 380 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 LMO3Q8TAP4 145 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 WFIKKN2Q8TEU8 576 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 BHMTQ93088 406 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 AZIN2Q96A70 460 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 PIWIL1Q96J94 861 aaKnown RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 SRRTQ9BXP5 876 aaKnown RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 SMOC1Q9H4F8 434 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 ZDHHC4Q9NPG8 344 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 RXFP3Q9NSD7 469 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 ELOVL2Q9NXB9 296 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 CALCOCO1Q9P1Z2 691 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 MBD1Q9UIS9 605 aaPredicted RBP11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 PILRBQ9UKJ0 227 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 HCN2Q9UL51 889 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 PLA2G4CQ9UP65 541 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 STON1Q9Y6Q2 735 aa11.36□□□□□ -0.59
VTI1BP3-201ENST00000550220 C4orf47A7E2U8 309 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 M0QYV0 167 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 TULP2O00295 520 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 KCNK5O95279 499 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 LCP1P13796 627 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 CSRP1P21291 193 aaKnown RBP11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 BMP6P22004 513 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 WASP42768 502 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 PTGER3P43115 390 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 SLC11A2P49281 568 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 UBE2HP62256 183 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 IRX4P78413 519 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 GFPT1Q06210 699 aaPredicted RBP11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 RING1Q06587 406 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 ZNF33AQ06730 810 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 ENPP2Q13822 863 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 WDR45BQ5MNZ6 344 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 TCEAL6Q6IPX3 200 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 PMF1Q6P1K2 205 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 MSANTD2Q6P1R3 559 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 BEND5Q7L4P6 421 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 RRAGAQ7L523 313 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 BHLHA9Q7RTU4 235 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 RBBP8NLQ8NC74 664 aaPredicted RBP11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 TFAP2BQ92481 460 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 EDEM1Q92611 657 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 TCEAL3Q969E4 200 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 ZNF419Q96HQ0 510 aaPredicted RBP11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 MRGPRX1Q96LB2 322 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 ACOX2Q99424 681 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 CD248Q9HCU0 757 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 CACNA2D2Q9NY47 1150 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 KIAA1468Q9P260 1216 aa11.35□□□□□ -0.59
VTI1BP3-201ENST00000550220 SUSD2Q9UGT4 822 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms