RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 CCDC195A0A1B0GUA6 201 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 BCLAF3A2AJT9 711 aaKnown RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 CCNT2O60583 730 aaKnown RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 RFPL1O75677 317 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 ENDOD1O94919 500 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 BAG2O95816 211 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 C1QAP02745 245 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 CD48P09326 243 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 PIM1P11309 404 aaPredicted RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 GPD1P21695 349 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 ADORA2AP29274 412 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 GABRB2P47870 512 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 CLCN2P51788 898 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 ALDH18A1P54886 795 aaKnown RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 CDH6P55285 790 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 MRPS5P82675 430 aaKnown RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 SP4Q02446 784 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 KDSRQ06136 332 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 NAB1Q13506 487 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 KRT81Q14533 505 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 FOXB2Q5VYV0 432 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 FBXO46Q6PJ61 603 aaPredicted RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 SCARA5Q6ZMJ2 495 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 MARK2Q7KZI7 788 aaKnown RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 ZBTB8OSQ8IWT0 167 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 FAM172AQ8WUF8 416 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 USP6NLQ92738 828 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 ADPGKQ9BRR6 497 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 CNPY3Q9BT09 278 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 PCSK1NQ9UHG2 260 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 COMMD3-BMI1R4GMX3 469 aa13.89□□□□□ -0.19
SMPDL3B-206ENST00000549094 DNAJC25-GNG10A0A024R161 153 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 SDR42E2A6NKP2 422 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 FAM159BA6NKW6 160 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 ZNF487B1APH4 448 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 APOL1O14791 398 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 GAS2O43903 313 aaKnown RBP13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 GLRA3O75311 464 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 PIAS1O75925 651 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 CST3P01034 146 aaPredicted RBP13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 PGK2P07205 417 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 TPSB2P20231 275 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 ZNF143P52747 638 aaPredicted RBP13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 CAPSQ13938 189 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 TPSAB1Q15661 275 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 LIN52Q52LA3 116 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 CDHR3Q6ZTQ4 885 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 DPP9Q86TI2 863 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 STKLD1Q8NE28 680 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 PPP4R1Q8TF05 950 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 TTC1Q99614 292 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 MECRQ9BV79 373 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 SPATA16Q9BXB7 569 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 C2orf40Q9H1Z8 148 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 PCMTD2Q9NV79 361 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 ETNK2Q9NVF9 386 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 DNAJC28Q9NX36 388 aa13.88□□□□□ -0.19
SMPDL3B-206ENST00000549094 ZSWIM8A7E2V4 1837 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 PRR5-ARHGAP8B1AHC4 643 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 KCNN4O15554 427 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 BUD23O43709 281 aaKnown RBP13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 PRPSAP2O60256 369 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 FAM189A1O60320 539 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 IL18RAPO95256 599 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 ERBB2P04626 1255 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 PRDX6P30041 224 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 GSTT1P30711 240 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 ICAM3P32942 547 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 COPAP53621 1224 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 ARHGAP8P85298 464 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 ZNF667Q5HYK9 610 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 MORN1Q5T089 497 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 FAM160B1Q5W0V3 765 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 RASSF3Q86WH2 238 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 PDSS2Q86YH6 399 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 EXOC8Q8IYI6 725 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 NDUFAF2Q8N183 169 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 CCDC33Q8N5R6 958 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 PHC3Q8NDX5 983 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 SOCS4Q8WXH5 440 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 ATP2A3Q93084 1043 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 MPHOSPH6Q99547 160 aaKnown RBP13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 TCHPQ9BT92 498 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 BCO2Q9BYV7 579 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 KLHL4Q9C0H6 718 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 CPSF3Q9UKF6 684 aaKnown RBP13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 APOBEC2Q9Y235 224 aaKnown RBP13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 LCTP09848 1927 aa13.87□□□□□ -0.19
SMPDL3B-206ENST00000549094 SMIM31A0A1B0GVY4 71 aa13.86□□□□□ -0.19
SMPDL3B-206ENST00000549094 B4GALT4O60513 344 aa13.86□□□□□ -0.19
SMPDL3B-206ENST00000549094 RGS20O76081 388 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms