RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 POLR2DO15514 142 aaKnown RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 HOXC11O43248 304 aaPredicted RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 TGFB1I1O43294 461 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 COCHO43405 550 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 DFNA5O60443 496 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 BRINP1O60477 761 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 PPP6R2O75170 966 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 TULP3O75386 442 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 RFPL3O75679 317 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 OXTRP30559 389 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 HOXD13P35453 343 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 ANP32AP39687 249 aaKnown RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 TUBP50607 506 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CACNA2D1P54289 1103 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CDH8P55286 799 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CCDC173Q0VFZ6 552 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 TARDBPQ13148 414 aaKnown RBP eCLIP8.94□□□□□ -0.98
TROAP-208ENST00000548817 LY6DQ14210 128 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 TEAD4Q15561 434 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CCDC157Q569K6 752 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CNNM4Q6P4Q7 775 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 SCARA5Q6ZMJ2 495 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 PRICKLE2Q7Z3G6 844 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 FAM35AQ86V20 835 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 C12orf40Q86WS4 652 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 ETFBKMTQ8IXQ9 262 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CEP57L1Q8IYX8 460 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CHPFQ8IZ52 775 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 LINC00301Q8NCQ3 95 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 C1orf216Q8TAB5 229 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 SCAMP5Q8TAC9 235 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 IGSF8Q969P0 613 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 TOE1Q96GM8 510 aaKnown RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 MRGPRX1Q96LB2 322 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 KCNK16Q96T55 309 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 DUSP9Q99956 384 aaKnown RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 MIR1-1HGQ9H1L0 117 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 CCSER2Q9H7U1 834 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 SLC39A2Q9NP94 309 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 ZDHHC4Q9NPG8 344 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 TLR8Q9NR97 1041 aaKnown RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 DNAJC17Q9NVM6 304 aaKnown RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 WSB2Q9NYS7 404 aaPredicted RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 USP36Q9P275 1121 aaKnown RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 ANKMY1Q9P2S6 941 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 MTMR6Q9Y217 621 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 HEMK1Q9Y5R4 338 aaPredicted RBP8.94□□□□□ -0.98
TROAP-208ENST00000548817 DOPEY1Q5JWR5 2465 aa8.94□□□□□ -0.98
TROAP-208ENST00000548817 ABCA12Q86UK0 2595 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 PVALEFA0A1B0GWK0 134 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 ENO4A6NNW6 628 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 METTL12A8MUP2 240 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 TERTO14746 1132 aaKnown RBP8.93□□□□□ -0.98
TROAP-208ENST00000548817 TLR5O60602 858 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 YEATS4O95619 227 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 IGLV3-19P01714 112 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 RPN1P04843 607 aaKnown RBP8.93□□□□□ -0.98
TROAP-208ENST00000548817 ATP5C1P36542 298 aaKnown RBP8.93□□□□□ -0.98
TROAP-208ENST00000548817 WASP42768 502 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 GRIA4P48058 902 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 ZNF132P52740 706 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 SLC5A3P53794 718 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 PCBP4P57723 403 aaKnown RBP8.93□□□□□ -0.98
TROAP-208ENST00000548817 ILKQ13418 452 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 NCOA4Q13772 614 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 E2F5Q15329 346 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 E2F4Q16254 413 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 KNOP1Q1ED39 458 aaKnown RBP8.93□□□□□ -0.98
TROAP-208ENST00000548817 SGSM1Q2NKQ1 1148 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 DCAF12L1Q5VU92 463 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 SNX30Q5VWJ9 437 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 FBXL19Q6PCT2 694 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 XKR5Q6UX68 686 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 TADA2BQ86TJ2 420 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 ACOT1Q86TX2 421 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 TMEM25Q86YD3 366 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 BBS7Q8IWZ6 715 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 C12orf56Q8IXR9 622 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 ZNF516Q92618 1163 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 ZNF578Q96N58 590 aaPredicted RBP8.93□□□□□ -0.98
TROAP-208ENST00000548817 GPR174Q9BXC1 333 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 BBS2Q9BXC9 721 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 FAM117AQ9C073 453 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 BLZF1Q9H2G9 400 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 SMYD3Q9H7B4 428 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 VRTNQ9H8Y1 702 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 KRT82Q9NSB4 513 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 BOD1L1Q8NFC6 3051 aa8.93□□□□□ -0.98
TROAP-208ENST00000548817 MYLKQ15746 1914 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 A0A1B0GVT2 93 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 NEDD8-MDP1E9PL57 170 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 ENC1O14682 589 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 KIF20AO95235 890 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 HSP90AA1P07900 732 aaKnown RBP8.92□□□□□ -0.98
TROAP-208ENST00000548817 FAM200BP0CF97 657 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 PDIA4P13667 645 aaKnown RBP8.92□□□□□ -0.98
TROAP-208ENST00000548817 AFMP43652 599 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 ME1P48163 572 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 CASP4P49662 377 aa8.92□□□□□ -0.98
TROAP-208ENST00000548817 MAP3K7CLP57077 242 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms