RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 COPAP53621 1224 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 PPP3CAQ08209 521 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 EFEMP1Q12805 493 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 ENPP2Q13822 863 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 PKP1Q13835 747 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 PPP1R26Q5T8A7 1209 aaPredicted RBP17.29■□□□□ 0.36
SSH1-208ENST00000548522 SLCO6A1Q86UG4 719 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 DNASE2BQ8WZ79 361 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 MMRN2Q9H8L6 949 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 PNPLA8Q9NP80 782 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 THAP10Q9P2Z0 257 aaPredicted RBP17.29■□□□□ 0.36
SSH1-208ENST00000548522 PCOLCE2Q9UKZ9 415 aa17.29■□□□□ 0.36
SSH1-208ENST00000548522 A0A1B0GTW7 788 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 PDXKO00764 312 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 SLFN14P0C7P3 912 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
SSH1-208ENST00000548522 HNRNPDQ14103 355 aaKnown RBP17.28■□□□□ 0.36
SSH1-208ENST00000548522 ZNF234Q14588 700 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 ZNF394Q53GI3 561 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 DCAF12L1Q5VU92 463 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 TMEM215Q68D42 235 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 MARCH9Q86YJ5 346 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 TMPRSS6Q8IU80 811 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 DENND1CQ8IV53 801 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 CEP57L1Q8IYX8 460 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 RBBP8NLQ8NC74 664 aaPredicted RBP17.28■□□□□ 0.36
SSH1-208ENST00000548522 PIWIL1Q96J94 861 aaKnown RBP17.28■□□□□ 0.36
SSH1-208ENST00000548522 NIF3L1Q9GZT8 377 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 ITM2CQ9NQX7 267 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 AGO1Q9UL18 857 aaKnown RBP17.28■□□□□ 0.36
SSH1-208ENST00000548522 GPSM3Q9Y4H4 160 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 PCDHB9Q9Y5E1 797 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 USP3Q9Y6I4 520 aa17.28■□□□□ 0.36
SSH1-208ENST00000548522 IKBKBO14920 756 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 F13A1P00488 732 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 PDIA4P13667 645 aaKnown RBP17.27■□□□□ 0.36
SSH1-208ENST00000548522 VAMP7P51809 220 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 ACAP1Q15027 740 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 CCNI2Q6ZMN8 369 aaPredicted RBP17.27■□□□□ 0.36
SSH1-208ENST00000548522 ANKS1BQ7Z6G8 1248 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 METTL3Q86U44 580 aaKnown RBP17.27■□□□□ 0.36
SSH1-208ENST00000548522 FAM124AQ86V42 546 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 MDM1Q8TC05 714 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 SIPA1Q96FS4 1042 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 DUSP16Q9BY84 665 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 CIPCQ9C0C6 399 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 CLIC5Q9NZA1 410 aa17.27■□□□□ 0.36
SSH1-208ENST00000548522 EIF2B4Q9UI10 523 aaKnown RBP17.27■□□□□ 0.36
SSH1-208ENST00000548522 MYH10P35580 1976 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 PRR29P0C7W0 189 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 ZSCAN22P10073 491 aaPredicted RBP17.26■□□□□ 0.35
SSH1-208ENST00000548522 RALAP11233 206 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 HLA-EP13747 358 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 DNM1Q05193 864 aaKnown RBP17.26■□□□□ 0.35
SSH1-208ENST00000548522 ZNF366Q8N895 744 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 CADM4Q8NFZ8 388 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 SETD7Q8WTS6 366 aaKnown RBP17.26■□□□□ 0.35
SSH1-208ENST00000548522 NDRG1Q92597 394 aaKnown RBP17.26■□□□□ 0.35
SSH1-208ENST00000548522 ARID3AQ99856 593 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 IMPG2Q9BZV3 1241 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 ZDHHC5Q9C0B5 715 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 GAREM1Q9H706 876 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 CYP3A43Q9HB55 503 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 ELOVL2Q9NXB9 296 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 TOR4AQ9NXH8 423 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 FRMD4BQ9Y2L6 1034 aa17.26■□□□□ 0.35
SSH1-208ENST00000548522 METTL12A8MUP2 240 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 BCAT2O15382 392 aaPredicted RBP17.25■□□□□ 0.35
SSH1-208ENST00000548522 SYNCRIPO60506 623 aaKnown RBP17.25■□□□□ 0.35
SSH1-208ENST00000548522 IGLV3-19P01714 112 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 EPHX1P07099 455 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 NR2F2P24468 414 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 PSEN1P49768 467 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 HLA-BQ31612 363 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 LAYNQ6UX15 382 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 TADA2BQ86TJ2 420 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 PIGZQ86VD9 579 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 ZNF276Q8N554 614 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 C1orf216Q8TAB5 229 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 BAHD1Q8TBE0 780 aaPredicted RBP17.25■□□□□ 0.35
SSH1-208ENST00000548522 PRCCQ92733 491 aaPredicted RBP17.25■□□□□ 0.35
SSH1-208ENST00000548522 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 TM7SF3Q9NS93 570 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 MARCH2Q9P0N8 246 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 MAPK8IP1Q9UQF2 711 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 BTBD3Q9Y2F9 522 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 NFE2L3Q9Y4A8 694 aa17.25■□□□□ 0.35
SSH1-208ENST00000548522 A0A1B0GVL5 298 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 A0A1B0GVT2 93 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 SLC12A8A0AV02 714 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 TULP2O00295 520 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 ATXN1LP0C7T5 689 aaKnown RBP17.24■□□□□ 0.35
SSH1-208ENST00000548522 PFKFB1P16118 471 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 CHKAP35790 457 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 COG7P83436 770 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 COL28A1Q2UY09 1125 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 SERPINA13PQ6UXR4 307 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 BHLHA9Q7RTU4 235 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 GLRX5Q86SX6 157 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms