RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 NXPE3Q969Y0 559 aa18.14■□□□□ 0.49
HDAC7-227ENST00000548080 MCEEQ96PE7 176 aa18.14■□□□□ 0.49
HDAC7-227ENST00000548080 UBXN6Q9BZV1 441 aa18.14■□□□□ 0.49
HDAC7-227ENST00000548080 TLR8Q9NR97 1041 aaKnown RBP18.14■□□□□ 0.49
HDAC7-227ENST00000548080 CA14Q9ULX7 337 aa18.14■□□□□ 0.49
HDAC7-227ENST00000548080 CPQQ9Y646 472 aa18.14■□□□□ 0.49
HDAC7-227ENST00000548080 TICRRQ7Z2Z1 1910 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 MIF4GDA9UHW6 222 aaKnown RBP18.13■□□□□ 0.49
HDAC7-227ENST00000548080 TLR5O60602 858 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 MBL2P11226 248 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-227ENST00000548080 GDI1P31150 447 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 PPP3CCP48454 512 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 HECTD3Q5T447 861 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 FAM102AQ5T9C2 384 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-227ENST00000548080 HFE2Q6ZVN8 426 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 MFSD6LQ8IWD5 586 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 TTC8Q8TAM2 541 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 SH3RF2Q8TEC5 729 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 EDAQ92838 391 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 ASIC4Q96FT7 647 aa18.13■□□□□ 0.49
HDAC7-227ENST00000548080 KIF26AQ9ULI4 1882 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 DDX3YO15523 660 aaKnown RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 PAPSS1O43252 624 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 SPOPO43791 374 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 SLU7O95391 586 aaKnown RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 IRF1P10914 325 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 SRFP11831 508 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 RARGP13631 454 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 ALADP13716 330 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 PSMC3P17980 439 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 MAN1A1P33908 653 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 RFC1P35251 1148 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 DNA2P51530 1060 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 SLC6A3Q01959 620 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 YAF2Q8IY57 180 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 CELF5Q8N6W0 485 aaKnown RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 EDEM1Q92611 657 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 WBP2Q969T9 261 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 PBKQ96KB5 322 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 PSMB7Q99436 277 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 TRMT61BQ9BVS5 477 aaKnown RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 METTL5Q9NRN9 209 aaKnown RBP18.12■□□□□ 0.49
HDAC7-227ENST00000548080 FBXL21Q9UKT6 434 aa18.12■□□□□ 0.49
HDAC7-227ENST00000548080 YJEFN3A6XGL0 299 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 E7ENQ6 273 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 CES2O00748 559 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 KCNK3O14649 394 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 PDGFBP01127 241 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-227ENST00000548080 CTNNA2P26232 953 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 CXCR5P32302 372 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 DAOAP59103 153 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 YWHAGP61981 247 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDAC7-227ENST00000548080 PIGHQ14442 188 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-227ENST00000548080 C10orf120Q5SQS8 335 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 SNX30Q5VWJ9 437 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 TRIM68Q6AZZ1 485 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 OLFML1Q6UWY5 402 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 SCUBE3Q8IX30 993 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 UBL4BQ8N7F7 174 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 CEP112Q8N8E3 955 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 JOSD2Q8TAC2 188 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 BPIFB1Q8TDL5 484 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 FNIP1Q8TF40 1166 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 COG1Q8WTW3 980 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 CD101Q93033 1021 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 CARD6Q9BX69 1037 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 NACA2Q9H009 215 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 BRD9Q9H8M2 597 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 GKN1Q9NS71 199 aa18.11■□□□□ 0.49
HDAC7-227ENST00000548080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDAC7-227ENST00000548080 LEFTY2O00292 366 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 ZNF185O15231 689 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 OLFM2O95897 454 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 WEE1P30291 646 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 SCNN1AP37088 669 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 OGDHQ02218 1023 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 TNK2Q07912 1038 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 USP4Q13107 963 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 ZNF77Q15935 545 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 PM20D1Q6GTS8 502 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 TRIM67Q6ZTA4 783 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 CPNE8Q86YQ8 564 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 CREG2Q8IUH2 290 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 UBALD2Q8IYN6 164 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 DEPDC1BQ8WUY9 529 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 PIWIL1Q96J94 861 aaKnown RBP18.1■□□□□ 0.49
HDAC7-227ENST00000548080 CAPZA3Q96KX2 299 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 CFAP97Q9P2B7 532 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 ZMYM5Q9UJ78 669 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 TMEM59LQ9UK28 342 aa18.1■□□□□ 0.49
HDAC7-227ENST00000548080 COL4A2P08572 1712 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 CCDC66A2RUB6 948 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 HMBSP08397 361 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 PSMA2P25787 234 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 CTNNA1P35221 906 aaKnown RBP18.09■□□□□ 0.49
HDAC7-227ENST00000548080 SLC7A9P82251 487 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 CKAP4Q07065 602 aaKnown RBP18.09■□□□□ 0.49
HDAC7-227ENST00000548080 SIGLEC14Q08ET2 396 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 EFEMP1Q12805 493 aa18.09■□□□□ 0.49
HDAC7-227ENST00000548080 MIB1Q86YT6 1006 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms