RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 SAR1BQ9Y6B6 198 aa16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
TRAFD1-203ENST00000547063 CHD7Q9P2D1 2997 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 C2orf78A6NCI8 922 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 KCNK3O14649 394 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 DDX3YO15523 660 aaKnown RBP16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 TBX18O95935 607 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 MBL2P11226 248 aaPredicted RBP16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 ADRA1BP35368 520 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 GJC1P36383 396 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 PEX5P50542 639 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 COPS2P61201 443 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 SLC7A9P82251 487 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 SCAPQ12770 1279 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 COL19A1Q14993 1142 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 PDK2Q15119 407 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 PRSS36Q5K4E3 855 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 ATAT1Q5SQI0 421 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 DAB2IPQ5VWQ8 1189 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 TXNDC8Q6A555 127 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 VSIG1Q86XK7 387 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 RCOR2Q8IZ40 523 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 MAB21L3Q8N8X9 362 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 ATP6V0D2Q8N8Y2 350 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 EXD1Q8NHP7 514 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 SHKBP1Q8TBC3 707 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 SLC39A13Q96H72 371 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 RIPOR3Q96MK2 946 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 ADAM33Q9BZ11 813 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 ADAM7Q9H2U9 754 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 CLDND1Q9NY35 253 aa16.45■□□□□ 0.22
TRAFD1-203ENST00000547063 TRANK1O15050 2925 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 LINC01565O15544 149 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 MSI1O43347 362 aaKnown RBP16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 IGLV3-27P01718 113 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 KRT1P04264 644 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 CKMP06732 381 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 RARAP10276 462 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 IL1R2P27930 398 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 AVPR1AP37288 418 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 HARS2P49590 506 aaKnown RBP16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 DNA2P51530 1060 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 CYP4F8P98187 520 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 ZC3H12AQ5D1E8 599 aaKnown RBP16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 GPR158Q5T848 1215 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 SEL1L2Q5TEA6 688 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 SYCE2Q6PIF2 218 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 CPNE8Q86YQ8 564 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 ARL14EPQ8N8R7 260 aaPredicted RBP16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 KCTD6Q8NC69 237 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 KRT35Q92764 455 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 BTN2A3PQ96KV6 586 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 FAM161BQ96MY7 647 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 HAPLN3Q96S86 360 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 OSBPL9Q96SU4 736 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 SNRNP25Q9BV90 132 aaKnown RBP16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 DCLK3Q9C098 648 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 TKTL2Q9H0I9 626 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 SLITRK6Q9H5Y7 841 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 ARHGEF38Q9NXL2 777 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 CALCOCO1Q9P1Z2 691 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 RNF14Q9UBS8 474 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 FZD10Q9ULW2 581 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 AP4E1Q9UPM8 1137 aa16.44■□□□□ 0.22
TRAFD1-203ENST00000547063 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 LRRD1A4D1F6 860 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 ZNF487B1APH4 448 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 TCF4P15884 667 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 FSHRP23945 695 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 WEE1P30291 646 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 CCR2P41597 374 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 MTHFRP42898 656 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 ATXN1P54253 815 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 KRT81Q14533 505 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 TEAD2Q15562 447 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 DPYSL2Q16555 572 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 RAB6CQ53S08 254 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 HABP4Q5JVS0 413 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 EP400NLQ6ZTU2 488 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 CMTM8Q8IZV2 173 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 HSPH1Q92598 858 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 ALG3Q92685 438 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 AZIN2Q96A70 460 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 FCRL2Q96LA5 508 aaPredicted RBP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 PEBP4Q96S96 227 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 NAP1L3Q99457 506 aaPredicted RBP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 KLF16Q9BXK1 252 aaPredicted RBP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 RNF38Q9H0F5 515 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 RAB6CQ9H0N0 254 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 CLEC1BQ9P126 229 aa16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 LSM7Q9UK45 103 aaKnown RBP16.43■□□□□ 0.22
TRAFD1-203ENST00000547063 KCNU1A8MYU2 1149 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 MOSPD3O75425 235 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 URI1O94763 535 aaPredicted RBP16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 LATS1O95835 1130 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 HTR7P34969 479 aa16.42■□□□□ 0.22
TRAFD1-203ENST00000547063 ARL4AP40617 200 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms