RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 OR1G1P47890 313 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 SNX16P57768 344 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 CROCCP2Q86T23 111 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 DNAAF3Q8N9W5 541 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 GSTCDQ8NEC7 633 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 DUSP16Q9BY84 665 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 ACSS2Q9NR19 701 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 RNF186Q9NXI6 227 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 DTLQ9NZJ0 730 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 TRPV2Q9Y5S1 764 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 A0A0G2JND7 137 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
SCAF11-209ENST00000547018 DUSP11O75319 330 aaKnown RBP13.16□□□□□ -0.3
SCAF11-209ENST00000547018 UBOX5O94941 541 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 EPHB2P29323 1055 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 GRIK1P39086 918 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 UNC93AQ86WB7 457 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 MAML1Q92585 1016 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 KCNN1Q92952 543 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 NPHS2Q9NP85 383 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 SFMBT1Q9UHJ3 866 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 A0A0G2JMZ2 1700 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 STIP1P31948 543 aaKnown RBP13.16□□□□□ -0.3
SCAF11-209ENST00000547018 MRPS5P82675 430 aaKnown RBP13.16□□□□□ -0.3
SCAF11-209ENST00000547018 PKDCCQ504Y2 493 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 TAF2Q6P1X5 1199 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 TTC25Q96NG3 672 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 MECRQ9BV79 373 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 UNKQ9C0B0 810 aaKnown RBP13.16□□□□□ -0.3
SCAF11-209ENST00000547018 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 UNC80Q8N2C7 3258 aa13.16□□□□□ -0.3
SCAF11-209ENST00000547018 DFFAO00273 331 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 PSMB4P28070 264 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 MATKP42679 507 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 FCGRTP55899 365 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 ADAM17P78536 824 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 CDC42EP1Q00587 391 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 ACTN3Q08043 901 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-209ENST00000547018 EFHC2Q5JST6 749 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 EFHC1Q5JVL4 640 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 COLGALT1Q8NBJ5 622 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 SMOQ99835 787 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 GRID1Q9ULK0 1009 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-209ENST00000547018 CDH23Q9H251 3354 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 UPP2O95045 317 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 PNPLA4P41247 253 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 MNAT1P51948 309 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 TPI1P60174 286 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 PDK2Q15119 407 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 SLC26A9Q7LBE3 791 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 AGGF1Q8N302 714 aaeCLIP13.15□□□□□ -0.3
SCAF11-209ENST00000547018 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 RMDN2Q96LZ7 410 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 ZNF395Q9H8N7 513 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-209ENST00000547018 PCMTD2Q9NV79 361 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 PAK5Q9P286 719 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 C5orf42Q9H799 3197 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 RNF103O00237 685 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 LPXNO60711 386 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 DRICH1Q6PGQ1 229 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-209ENST00000547018 CRYBG2Q8N1P7 616 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 CYTH2Q99418 400 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 TMLHEQ9NVH6 421 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 BAIAP2L1Q9UHR4 511 aa13.15□□□□□ -0.3
SCAF11-209ENST00000547018 CCT8L1PA6NM43 557 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 HAS3O00219 553 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 MDM4O15151 490 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 NEBLO76041 1014 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 MGAT1P26572 445 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
SCAF11-209ENST00000547018 EML3Q32P44 896 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 SPDYCQ5MJ68 293 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 PNPLA1Q8N8W4 532 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 TFB1MQ8WVM0 346 aaKnown RBP13.14□□□□□ -0.31
SCAF11-209ENST00000547018 SERAC1Q96JX3 654 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 MTMR10Q9NXD2 777 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 STAP1Q9ULZ2 295 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 SUN1O94901 812 aa13.14□□□□□ -0.31
SCAF11-209ENST00000547018 SETSIPP0DME0 302 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms