RNA–Protein interactions for RNA: ENST00000546455.5

PCED1B-202, Transcript of PC-esterase domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCED1B, Length 2,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-202ENST00000546455 NUDCD3Q8IVD9 361 aa16.08■□□□□ 0.16
PCED1B-202ENST00000546455 TTC39CQ8N584 583 aa16.08■□□□□ 0.16
PCED1B-202ENST00000546455 MCUQ8NE86 351 aa16.08■□□□□ 0.16
PCED1B-202ENST00000546455 USP6NLQ92738 828 aa16.08■□□□□ 0.16
PCED1B-202ENST00000546455 C11orf84Q9BUA3 381 aaPredicted RBP16.08■□□□□ 0.16
PCED1B-202ENST00000546455 FRMD8Q9BZ67 464 aaPredicted RBP16.08■□□□□ 0.16
PCED1B-202ENST00000546455 TAS2R1Q9NYW7 299 aa16.08■□□□□ 0.16
PCED1B-202ENST00000546455 FAM159BA6NKW6 160 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 SKAP2O75563 359 aaPredicted RBP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 GCATO75600 419 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 KRT38O76015 456 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 DESP17661 470 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 KPNB1Q14974 876 aaKnown RBP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 LGSNQ5TDP6 509 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 C9orf57Q5W0N0 161 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 C16orf46Q6P387 395 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 KBTBD7Q8WVZ9 684 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 QKIQ96PU8 341 aaKnown RBP eCLIP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 RECQL4O94761 1208 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 SNAI1O95863 264 aaPredicted RBP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 SETSIPP0DME0 302 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 SMPD1P17405 629 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 CCNFP41002 786 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 PTDSS1P48651 473 aaKnown RBP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 ERFP50548 548 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 CCNG1P51959 295 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 SESN2P58004 480 aaPredicted RBP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 NT5DC4Q86YG4 428 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 TREML1Q86YW5 311 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 PDCD7Q8N8D1 485 aaKnown RBP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 MAB21L3Q8N8X9 362 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 BEST2Q8NFU1 509 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 ARHGEF4Q9NR80 690 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 PPARGC1AQ9UBK2 798 aaKnown RBP16.07■□□□□ 0.16
PCED1B-202ENST00000546455 PCDHA11Q9Y5I1 949 aa16.07■□□□□ 0.16
PCED1B-202ENST00000546455 KLF11O14901 512 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 KRT36O76013 467 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ENO1P06733 434 aaKnown RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 TKTP29401 623 aaKnown RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 GMPRP36959 345 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ABL2P42684 1182 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 PTPN9P43378 593 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 AQP5P55064 265 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 BST2Q10589 180 aaKnown RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ZBTB6Q15916 424 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 TEX44Q53QW1 395 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 SLC27A1Q6PCB7 646 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 SLC26A9Q7LBE3 791 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 TP53INP2Q8IXH6 220 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ADGRF2Q8IZF7 708 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ENDOVQ8N8Q3 282 aaKnown RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 GPRC5AQ8NFJ5 357 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 WDR60Q8WVS4 1066 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 CENPIQ92674 756 aaPredicted RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 MCUR1Q96AQ8 359 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 FAM149B1Q96BN6 582 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ADAMTS10Q9H324 1103 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 RNF181Q9P0P0 153 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 SEPT10Q9P0V9 454 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 COL1A2P08123 1366 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 E2F8A0AVK6 867 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ADCY6O43306 1168 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 MFSD11O43934 449 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 F7P08709 466 aaPredicted RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 GNL1P36915 607 aaPredicted RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 RABGGTBP53611 331 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 SLC8A3P57103 927 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 OCRLQ01968 901 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 OLIG2Q13516 323 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 RCN2Q14257 317 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 CRYMQ14894 314 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 DCAF4L1Q3SXM0 396 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ACSBG2Q5FVE4 666 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ANKRD52Q8NB46 1076 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 STKLD1Q8NE28 680 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 HTR3CQ8WXA8 447 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 LRRC39Q96DD0 335 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 NAF1Q96HR8 494 aaKnown RBP16.06■□□□□ 0.16
PCED1B-202ENST00000546455 VTA1Q9NP79 307 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 SIRPGQ9P1W8 387 aa16.06■□□□□ 0.16
PCED1B-202ENST00000546455 ZSWIM8A7E2V4 1837 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 HNRNPCL1O60812 293 aaKnown RBP16.05■□□□□ 0.16
PCED1B-202ENST00000546455 LYPLA1O75608 230 aaPredicted RBP16.05■□□□□ 0.16
PCED1B-202ENST00000546455 MMP3P08254 477 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 TPSB2P20231 275 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 AP1B1Q10567 949 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 TPSAB1Q15661 275 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 ARHGAP17Q68EM7 881 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 CES3Q6UWW8 571 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 DEFB106AQ8N104 65 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 COLGALT1Q8NBJ5 622 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 TFB1MQ8WVM0 346 aaKnown RBP16.05■□□□□ 0.16
PCED1B-202ENST00000546455 C7orf26Q96N11 449 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 TRIM6Q9C030 488 aaPredicted RBP16.05■□□□□ 0.16
PCED1B-202ENST00000546455 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
PCED1B-202ENST00000546455 USP3Q9Y6I4 520 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms