RNA–Protein interactions for RNA: ENST00000545561.1

HPS5-210, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, human

TSL 2

Gene HPS5, Length 1,121 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HPS5-210	ENST00000545561	EIF3A	Q14152	1382 aa	Known RBP	4.88	□□□□□ -1.63
HPS5-210	ENST00000545561	TONSL	Q96HA7	1378 aa		4.88	□□□□□ -1.63
HPS5-210	ENST00000545561	RAB3GAP2	Q9H2M9	1393 aa		4.88	□□□□□ -1.63
HPS5-210	ENST00000545561	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
HPS5-210	ENST00000545561	LY6G6E	A0A0G2JKS1	128 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561		F8W8V4	182 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	FOXN3	O00409	490 aa	Predicted RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	ANXA2	P07355	339 aa	Known RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	TMEM225B	P0DP42	221 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	HTR7	P34969	479 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	TNNT3	P45378	269 aa	Predicted RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	FOXG1	P55316	489 aa	Predicted RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	RPS13	P62277	151 aa	Known RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	HSF1	Q00613	529 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	CCDC15	Q0P6D6	951 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	TRDN	Q13061	729 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	GALE	Q14376	348 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	IRF2BP2	Q7Z5L9	587 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	UBE2Q1	Q7Z7E8	422 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	C14orf80	Q86SX3	495 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	FSTL5	Q8N475	847 aa	Predicted RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	PHKB	Q93100	1093 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	WAC	Q9BTA9	647 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	CINP	Q9BW66	212 aa	Predicted RBP	4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	SMC4	Q9NTJ3	1288 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	TMEM184C	Q9NVA4	438 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	OGFR	Q9NZT2	677 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	SEMA5B	Q9P283	1151 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	PCDHGB6	Q9Y5F9	930 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	MAPK8IP3	Q9UPT6	1336 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	ZMYM2	Q9UBW7	1377 aa		4.87	□□□□□ -1.63
HPS5-210	ENST00000545561	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	MYMK	A6NI61	221 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	TRIM38	O00635	465 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	IKBKB	O14920	756 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	CA12	O43570	354 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	PRAMEF2	O60811	474 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	CNOT3	O75175	753 aa	Known RBP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	CCDC172	P0C7W6	258 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	CTSA	P10619	480 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	NEFH	P12036	1026 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	TACR3	P29371	465 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	KCNJ4	P48050	445 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	CHAF1A	Q13111	956 aa	Predicted RBP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	DNASE1L3	Q13609	305 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	FHL1	Q13642	323 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	PFKFB3	Q16875	520 aa	Predicted RBP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	TRIM71	Q2Q1W2	868 aa	Known RBP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	GRHL2	Q6ISB3	625 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	PIP4P1	Q86T03	277 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	ANKRD13A	Q8IZ07	590 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	KRT78	Q8N1N4	520 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	VCPIP1	Q96JH7	1222 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	ADGRE3	Q9BY15	652 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	VPS45	Q9NRW7	570 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	DIAPH3	Q9NSV4	1193 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	TERF2IP	Q9NYB0	399 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	SPATA31A1	Q5TZJ5	1347 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	ARHGAP31	Q2M1Z3	1444 aa		4.86	□□□□□ -1.63
HPS5-210	ENST00000545561	INSIG1	O15503	277 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	THAP12	O43422	761 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	WDR47	O94967	919 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	IL18RAP	O95256	599 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	JAK3	P52333	1124 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	YPEL5	P62699	121 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	MAP2K1	Q02750	393 aa	Predicted RBP	4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	FHL3	Q13643	280 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	ACOX1	Q15067	660 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	FAM110C	Q1W6H9	321 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	SLC9C1	Q4G0N8	1177 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	KRT28	Q7Z3Y7	464 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	ANKRD13B	Q86YJ7	626 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	SUN3	Q8TAQ9	357 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	PANK2	Q9BZ23	570 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	NUAK2	Q9H093	628 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	SLC25A32	Q9H2D1	315 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	PNPLA8	Q9NP80	782 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	HEYL	Q9NQ87	328 aa	Predicted RBP	4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	SNX13	Q9Y5W8	968 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	KIF16B	Q96L93	1317 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	NCOA1	Q15788	1441 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	MYOM3	Q5VTT5	1437 aa		4.85	□□□□□ -1.63
HPS5-210	ENST00000545561	ABCC8	Q09428	1581 aa		4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	POLA1	P09884	1462 aa	Predicted RBP	4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	CCDC18	Q5T9S5	1454 aa		4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	MBP	P02686	304 aa	Predicted RBP	4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	HSPA5	P11021	654 aa	Known RBP	4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	CYP19A1	P11511	503 aa	Predicted RBP	4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	GALNS	P34059	522 aa		4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	GTF2A1	P52655	376 aa	Predicted RBP	4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	MTAP	Q13126	283 aa		4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	STIM1	Q13586	685 aa		4.84	□□□□□ -1.63
HPS5-210	ENST00000545561	DAG1	Q14118	895 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms