RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TSG101Q99816 390 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 FAM83CQ9BQN1 747 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SDCBP2Q9H190 292 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SEMA4AQ9H3S1 761 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 FAM124BQ9H5Z6 455 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 TMEM8AQ9HCN3 771 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SRA1Q9HD15 236 aaKnown RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 DMAP1Q9NPF5 467 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PRMT8Q9NR22 394 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 KRT82Q9NSB4 513 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 TMEM30AQ9NV96 361 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 SPATA6Q9NWH7 488 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-223ENST00000545440 GTSE1Q9NYZ3 720 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 GCNT4Q9P109 453 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 CCL26Q9Y258 94 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PCDHA5Q9Y5H7 936 aa8.14□□□□□ -1.11
SNHG1-223ENST00000545440 PSMA7O14818 248 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 LAMTOR5O43504 91 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 STX10O60499 249 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 RTN3O95197 1032 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 OLFM2O95897 454 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 CELA2BP08218 269 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 SP9P0CG40 484 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 CCNE1P24864 410 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 GCLMP48507 274 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 MXI1P50539 228 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 NDST1P52848 882 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 CACNA2D1P54289 1103 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 CDH8P55286 799 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 FKBP3Q00688 224 aaKnown RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 TNK2Q07912 1038 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 STIM1Q13586 685 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 LRRC32Q14392 662 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 MTF1Q14872 753 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 LRRC14Q15048 493 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 PDGFRLQ15198 375 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 ITPRIPL2Q3MIP1 535 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 SPOPLQ6IQ16 392 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 CC2D1AQ6P1N0 951 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 FOXR2Q6PJQ5 311 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 MAML2Q8IZL2 1156 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 FUKQ8N0W3 1084 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 ADSSL1Q8N142 457 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 CRYBG2Q8N1P7 616 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 KIAA1958Q8N8K9 716 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 FBXL13Q8NEE6 735 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 PDZD8Q8NEN9 1154 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 RIN3Q8TB24 985 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 OVCA2Q8WZ82 227 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 SLC22A12Q96S37 553 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 MDFIQ99750 246 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 B3GNT5Q9BYG0 378 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 DNAI2Q9GZS0 605 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 CYP3A43Q9HB55 503 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 TRPC7Q9HCX4 862 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 HPS4Q9NQG7 708 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 TRPM5Q9NZQ8 1165 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 HMGXB4Q9UGU5 601 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 NDRG2Q9UN36 371 aaKnown RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 ARHGAP26Q9UNA1 814 aa8.13□□□□□ -1.11
SNHG1-223ENST00000545440 EP300Q09472 2414 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 NYNRINQ9P2P1 1898 aaKnown RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 ZFHX2Q9C0A1 2572 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 TNRC6BQ9UPQ9 1833 aaKnown RBP8.13□□□□□ -1.11
SNHG1-223ENST00000545440 FAM92AA1XBS5 289 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 C2orf78A6NCI8 922 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 ZNF840PA6NDX5 716 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 CLDN5O00501 218 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 CILPO75339 1184 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 OAS1P00973 400 aaKnown RBP8.12□□□□□ -1.11
SNHG1-223ENST00000545440 ALBP02768 609 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 CHRNB1P11230 501 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 CCDC130P13994 396 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 CDC25BP30305 580 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 SOX9P48436 509 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 TUBP50607 506 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 CCR3P51677 355 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 SLC5A3P53794 718 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 RAC1P63000 192 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 SLC7A9P82251 487 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 AMPD2Q01433 879 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 TAF10Q12962 218 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 MTAPQ13126 283 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 PPP2R5DQ14738 602 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 DGKKQ5KSL6 1271 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 TXNDC11Q6PKC3 985 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 PAQR9Q6ZVX9 377 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 ACOT1Q86TX2 421 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 NUP93Q8N1F7 819 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 SYNPOQ8N3V7 929 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 CPA6Q8N4T0 437 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 TTC39CQ8N584 583 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 SLC2A14Q8TDB8 520 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 OSCP1Q8WVF1 389 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 NELL1Q92832 810 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 ATP2A3Q93084 1043 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 ZNF775Q96BV0 537 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-223ENST00000545440 DHTKD1Q96HY7 919 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-223ENST00000545440 MED10Q9BTT4 135 aa8.12□□□□□ -1.11
SNHG1-223ENST00000545440 NT5C1AQ9BXI3 368 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms